Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU473948 |
| length | 710 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 4 |
| gene id | G399489 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3017290 ~ 3295273 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474037 | lncRNA | downstream | 11213 | 3273556 ~ 3274842 (-) | True | G399543 |
| TU474024 | lncRNA | downstream | 36729 | 3235643 ~ 3249326 (-) | True | G399530 |
| TU474035 | lncRNA | downstream | 41011 | 3243557 ~ 3245044 (-) | True | G399541 |
| TU474000 | lncRNA | downstream | 85304 | 3182972 ~ 3200751 (-) | True | G399507 |
| TU474031 | lncRNA | downstream | 91147 | 3185836 ~ 3194908 (-) | True | G399537 |
| XR_004577534.1 | lncRNA | upstream | 69043 | 3360671 ~ 3363611 (-) | True | LOC113534314 |
| TU474141 | lncRNA | upstream | 69046 | 3360674 ~ 3363596 (-) | False | LOC113534314 |
| TU474142 | lncRNA | upstream | 69046 | 3360674 ~ 3363596 (-) | False | LOC113534314 |
| TU474150 | lncRNA | upstream | 123337 | 3414965 ~ 3431282 (-) | True | G399629 |
| XR_004577577.1 | lncRNA | upstream | 223184 | 3514812 ~ 3516233 (-) | True | LOC117596450 |
| XM_026911585.2 | mRNA | downstream | 51731 | 3224065 ~ 3234324 (-) | True | LOC113525126 |
| XM_026911562.2 | mRNA | downstream | 63275 | 3206908 ~ 3222780 (-) | True | jpt1b |
| XM_034301638.1 | mRNA | downstream | 89520 | 3184229 ~ 3196535 (-) | True | LOC113525117 |
| XM_034301637.1 | mRNA | downstream | 89525 | 3184229 ~ 3196530 (-) | False | LOC113525117 |
| XM_034301639.1 | mRNA | downstream | 97968 | 3178517 ~ 3188087 (-) | True | LOC117595704 |
| XM_034301771.1 | mRNA | upstream | 4291 | 3295919 ~ 3309397 (-) | False | gga3b |
| XM_034301770.1 | mRNA | upstream | 4291 | 3295919 ~ 3309397 (-) | True | gga3b |
| XM_034301772.1 | mRNA | upstream | 4291 | 3295919 ~ 3307173 (-) | False | gga3b |
| XM_026927230.2 | mRNA | upstream | 90486 | 3382114 ~ 3403530 (-) | True | evplb |
| XM_026927232.2 | mRNA | upstream | 90486 | 3382114 ~ 3394690 (-) | False | evplb |
| TU473964 | other | downstream | 10100 | 3203290 ~ 3275955 (-) | False | G399489 |
| TU473965 | other | downstream | 10100 | 3264713 ~ 3275955 (-) | False | G399489 |
| TU473969 | other | downstream | 10100 | 3273840 ~ 3275955 (-) | False | G399489 |
| TU474032 | other | downstream | 51754 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
| trnay-gua_7 | other | downstream | 116634 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| trnae-cuc_42 | other | upstream | 19733 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| XR_003403535.2 | other | upstream | 69254 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| XR_003403536.1 | other | upstream | 70120 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403516.2 | other | upstream | 832621 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_004577542.1 | other | upstream | 1669474 | 4961102 ~ 5008461 (-) | False | sept7a |
