Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU473997 |
| length | 221 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC113525117 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3147299 ~ 3196563 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU473983 | lncRNA | downstream | 84407 | 3011867 ~ 3070268 (-) | True | G399494 |
| TU473979 | lncRNA | downstream | 108163 | 3001698 ~ 3046512 (-) | False | G399491 |
| TU473974 | lncRNA | downstream | 108163 | 3041817 ~ 3046512 (-) | True | G399491 |
| TU473980 | lncRNA | downstream | 119020 | 3027698 ~ 3035655 (-) | False | G399492 |
| TU473981 | lncRNA | downstream | 119020 | 3031407 ~ 3035655 (-) | True | G399492 |
| TU474026 | lncRNA | upstream | 12861 | 3167877 ~ 3168603 (-) | True | G399532 |
| TU474000 | lncRNA | upstream | 27956 | 3182972 ~ 3200751 (-) | True | G399507 |
| TU474031 | lncRNA | upstream | 30820 | 3185836 ~ 3194908 (-) | True | G399537 |
| TU474024 | lncRNA | upstream | 80627 | 3235643 ~ 3249326 (-) | True | G399530 |
| TU474035 | lncRNA | upstream | 88541 | 3243557 ~ 3245044 (-) | True | G399541 |
| XM_034301635.1 | mRNA | downstream | 17100 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301634.1 | mRNA | downstream | 17100 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301631.1 | mRNA | downstream | 17100 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301632.1 | mRNA | downstream | 17102 | 3118335 ~ 3137573 (-) | True | LOC113525116 |
| XM_034301457.1 | mRNA | downstream | 42423 | 3079234 ~ 3112252 (-) | True | si:ch211-108d22.2 |
| XM_034301639.1 | mRNA | upstream | 23501 | 3178517 ~ 3188087 (-) | True | LOC117595704 |
| XM_034301638.1 | mRNA | upstream | 29213 | 3184229 ~ 3196535 (-) | True | LOC113525117 |
| XM_034301637.1 | mRNA | upstream | 29213 | 3184229 ~ 3196530 (-) | False | LOC113525117 |
| XM_026911562.2 | mRNA | upstream | 51892 | 3206908 ~ 3222780 (-) | True | jpt1b |
| XM_026911585.2 | mRNA | upstream | 69049 | 3224065 ~ 3234324 (-) | True | LOC113525126 |
| TU473971 | other | downstream | 190518 | 2961713 ~ 2964157 (-) | True | G399490 |
| TU473396 | other | downstream | 728069 | 2372296 ~ 2426606 (-) | True | G399028 |
| trnad-guc_31 | other | downstream | 906444 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473235 | other | downstream | 1273617 | 1825341 ~ 1881058 (-) | False | G398890 |
| TU473233 | other | downstream | 1289832 | 1730090 ~ 1864843 (-) | True | G398890 |
| trnay-gua_7 | other | upstream | 14318 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473964 | other | upstream | 48274 | 3203290 ~ 3275955 (-) | False | G399489 |
| TU474032 | other | upstream | 69084 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
| TU473965 | other | upstream | 109697 | 3264713 ~ 3275955 (-) | False | G399489 |
| TU473969 | other | upstream | 118824 | 3273840 ~ 3275955 (-) | False | G399489 |
