Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474035 |
| length | 584 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G399541 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3243557 ~ 3245044 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474000 | lncRNA | downstream | 42806 | 3182972 ~ 3200751 (-) | True | G399507 |
| TU473995 | lncRNA | downstream | 46994 | 3147299 ~ 3196563 (-) | False | LOC113525117 |
| TU474031 | lncRNA | downstream | 48649 | 3185836 ~ 3194908 (-) | True | G399537 |
| TU474026 | lncRNA | downstream | 74954 | 3167877 ~ 3168603 (-) | True | G399532 |
| TU473994 | lncRNA | downstream | 88541 | 3147299 ~ 3155016 (-) | False | LOC113525117 |
| TU474037 | lncRNA | upstream | 28512 | 3273556 ~ 3274842 (-) | True | G399543 |
| TU473948 | lncRNA | upstream | 41011 | 3286055 ~ 3291628 (-) | False | G399489 |
| TU473957 | lncRNA | upstream | 41538 | 3286582 ~ 3295273 (-) | False | G399489 |
| XR_004577534.1 | lncRNA | upstream | 115627 | 3360671 ~ 3363611 (-) | True | LOC113534314 |
| TU474141 | lncRNA | upstream | 115630 | 3360674 ~ 3363596 (-) | False | LOC113534314 |
| XM_026911585.2 | mRNA | downstream | 9233 | 3224065 ~ 3234324 (-) | True | LOC113525126 |
| XM_026911562.2 | mRNA | downstream | 20777 | 3206908 ~ 3222780 (-) | True | jpt1b |
| XM_034301638.1 | mRNA | downstream | 47022 | 3184229 ~ 3196535 (-) | True | LOC113525117 |
| XM_034301637.1 | mRNA | downstream | 47027 | 3184229 ~ 3196530 (-) | False | LOC113525117 |
| XM_034301639.1 | mRNA | downstream | 55470 | 3178517 ~ 3188087 (-) | True | LOC117595704 |
| XM_034301458.1 | mRNA | upstream | 5042 | 3250086 ~ 3293868 (-) | True | LOC113534415 |
| XM_034301771.1 | mRNA | upstream | 50875 | 3295919 ~ 3309397 (-) | False | gga3b |
| XM_034301770.1 | mRNA | upstream | 50875 | 3295919 ~ 3309397 (-) | True | gga3b |
| XM_034301772.1 | mRNA | upstream | 50875 | 3295919 ~ 3307173 (-) | False | gga3b |
| XM_026927230.2 | mRNA | upstream | 137070 | 3382114 ~ 3403530 (-) | True | evplb |
| TU474032 | other | downstream | 9256 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
| trnay-gua_7 | other | downstream | 74136 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473971 | other | downstream | 279400 | 2961713 ~ 2964157 (-) | True | G399490 |
| TU473396 | other | downstream | 816951 | 2372296 ~ 2426606 (-) | True | G399028 |
| trnad-guc_31 | other | downstream | 995326 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473965 | other | upstream | 19669 | 3264713 ~ 3275955 (-) | False | G399489 |
| TU473969 | other | upstream | 28796 | 3273840 ~ 3275955 (-) | False | G399489 |
| trnae-cuc_42 | other | upstream | 66317 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| XR_003403535.2 | other | upstream | 115838 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| XR_003403536.1 | other | upstream | 116704 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
