Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474391 |
| length | 275 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G399811 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3782157 ~ 3782431 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474386 | lncRNA | downstream | 6457 | 3775305 ~ 3775700 (-) | True | G399806 |
| TU474384 | lncRNA | downstream | 8529 | 3773333 ~ 3773628 (-) | True | G399804 |
| TU474360 | lncRNA | downstream | 52772 | 3728939 ~ 3729385 (-) | True | G399783 |
| TU474312 | lncRNA | downstream | 146597 | 3601046 ~ 3635560 (-) | True | G399742 |
| TU474308 | lncRNA | downstream | 196943 | 3584901 ~ 3585214 (-) | True | G399738 |
| TU474500 | lncRNA | upstream | 33181 | 3815612 ~ 3855630 (-) | True | G399900 |
| TU474509 | lncRNA | upstream | 58172 | 3840603 ~ 3840914 (-) | True | G399909 |
| TU474515 | lncRNA | upstream | 98962 | 3881393 ~ 3907811 (-) | True | G399910 |
| TU474541 | lncRNA | upstream | 103380 | 3885811 ~ 3887708 (-) | True | G399929 |
| TU474514 | lncRNA | upstream | 112294 | 3894725 ~ 3907811 (-) | False | G399910 |
| XM_026927512.2 | mRNA | downstream | 28037 | 3747482 ~ 3754120 (-) | True | LOC113534607 |
| XM_034301666.1 | mRNA | downstream | 181667 | 3585274 ~ 3600490 (-) | False | ubn2b |
| XM_034301665.1 | mRNA | downstream | 181669 | 3585274 ~ 3600488 (-) | True | ubn2b |
| XM_034301667.1 | mRNA | downstream | 181671 | 3585274 ~ 3600486 (-) | False | ubn2b |
| XM_026927743.2 | mRNA | downstream | 291990 | 3488273 ~ 3490167 (-) | True | junbb |
| XM_026927404.2 | mRNA | upstream | 12428 | 3794859 ~ 3809349 (-) | False | si:ch211-106h11.3 |
| XM_026927403.2 | mRNA | upstream | 12428 | 3794859 ~ 3809349 (-) | True | si:ch211-106h11.3 |
| XM_026927753.2 | mRNA | upstream | 40315 | 3822746 ~ 3825504 (-) | True | LOC113534792 |
| XM_034301526.1 | mRNA | upstream | 144822 | 3927253 ~ 3937638 (-) | True | rangap1a |
| XM_026927370.2 | mRNA | upstream | 210794 | 3993225 ~ 3999563 (-) | True | LOC113534507 |
| XR_003403536.1 | other | downstream | 420331 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 421203 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 470725 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473965 | other | downstream | 506202 | 3264713 ~ 3275955 (-) | False | G399489 |
| XR_003403516.2 | other | upstream | 341818 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_004577542.1 | other | upstream | 1178671 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1804967 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 2390557 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 2589219 | 6371650 ~ 6374490 (-) | False | polr1h |
