Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474500 |
| length | 680 |
| lncRNA type | sense_over |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G399900 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3815612 ~ 3855630 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474391 | lncRNA | downstream | 33181 | 3782157 ~ 3782431 (-) | True | G399811 |
| TU474386 | lncRNA | downstream | 39912 | 3775305 ~ 3775700 (-) | True | G399806 |
| TU474384 | lncRNA | downstream | 41984 | 3773333 ~ 3773628 (-) | True | G399804 |
| TU474360 | lncRNA | downstream | 86227 | 3728939 ~ 3729385 (-) | True | G399783 |
| TU474312 | lncRNA | downstream | 180052 | 3601046 ~ 3635560 (-) | True | G399742 |
| TU474515 | lncRNA | upstream | 25763 | 3881393 ~ 3907811 (-) | True | G399910 |
| TU474541 | lncRNA | upstream | 30181 | 3885811 ~ 3887708 (-) | True | G399929 |
| TU474514 | lncRNA | upstream | 39095 | 3894725 ~ 3907811 (-) | False | G399910 |
| TU474518 | lncRNA | upstream | 45149 | 3900779 ~ 3951397 (-) | False | G399910 |
| TU474511 | lncRNA | upstream | 45566 | 3901196 ~ 3907811 (-) | False | G399910 |
| XM_026927404.2 | mRNA | downstream | 6263 | 3794859 ~ 3809349 (-) | False | si:ch211-106h11.3 |
| XM_026927403.2 | mRNA | downstream | 6263 | 3794859 ~ 3809349 (-) | True | si:ch211-106h11.3 |
| XM_026927512.2 | mRNA | downstream | 61492 | 3747482 ~ 3754120 (-) | True | LOC113534607 |
| XM_034301666.1 | mRNA | downstream | 215122 | 3585274 ~ 3600490 (-) | False | ubn2b |
| XM_034301665.1 | mRNA | downstream | 215124 | 3585274 ~ 3600488 (-) | True | ubn2b |
| XM_034301526.1 | mRNA | upstream | 71623 | 3927253 ~ 3937638 (-) | True | rangap1a |
| XM_026927370.2 | mRNA | upstream | 137595 | 3993225 ~ 3999563 (-) | True | LOC113534507 |
| XM_026927361.2 | mRNA | upstream | 187415 | 4043045 ~ 4059491 (-) | False | LOC113534503 |
| XM_026927360.2 | mRNA | upstream | 187415 | 4043045 ~ 4059478 (-) | True | LOC113534503 |
| XM_034301488.1 | mRNA | upstream | 251246 | 4106876 ~ 4117916 (-) | False | LOC113534511 |
| XR_003403536.1 | other | downstream | 453786 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 454658 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 504180 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473965 | other | downstream | 539657 | 3264713 ~ 3275955 (-) | False | G399489 |
| XR_003403516.2 | other | upstream | 268619 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_004577542.1 | other | upstream | 1105472 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1731768 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 2317358 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 2516020 | 6371650 ~ 6374490 (-) | False | polr1h |
