Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474561 |
| length | 239 |
| lncRNA type | read_through |
| GC content | 0.59 |
| exon number | 3 |
| gene id | G399945 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3924966 ~ 4037931 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474524 | lncRNA | downstream | 6851 | 3916468 ~ 3918115 (-) | True | G399913 |
| TU474550 | lncRNA | downstream | 13619 | 3910640 ~ 3911347 (-) | True | G399935 |
| TU474515 | lncRNA | downstream | 17155 | 3881393 ~ 3907811 (-) | True | G399910 |
| TU474514 | lncRNA | downstream | 17155 | 3894725 ~ 3907811 (-) | False | G399910 |
| TU474511 | lncRNA | downstream | 17155 | 3901196 ~ 3907811 (-) | False | G399910 |
| TU474609 | lncRNA | upstream | 62166 | 4100097 ~ 4106327 (-) | True | G399990 |
| TU474649 | lncRNA | upstream | 115107 | 4153038 ~ 4154893 (-) | False | LOC113534684 |
| TU474749 | lncRNA | upstream | 152810 | 4190741 ~ 4276482 (-) | True | G400085 |
| TU474784 | lncRNA | upstream | 196472 | 4234403 ~ 4293157 (-) | False | G400112 |
| TU474819 | lncRNA | upstream | 242846 | 4280777 ~ 4281433 (-) | True | G400131 |
| XM_026927753.2 | mRNA | downstream | 99462 | 3822746 ~ 3825504 (-) | True | LOC113534792 |
| XM_026927404.2 | mRNA | downstream | 115617 | 3794859 ~ 3809349 (-) | False | si:ch211-106h11.3 |
| XM_026927403.2 | mRNA | downstream | 115617 | 3794859 ~ 3809349 (-) | True | si:ch211-106h11.3 |
| XM_026927512.2 | mRNA | downstream | 170846 | 3747482 ~ 3754120 (-) | True | LOC113534607 |
| XM_034301667.1 | mRNA | downstream | 324480 | 3585274 ~ 3600486 (-) | False | ubn2b |
| XM_026927361.2 | mRNA | upstream | 5114 | 4043045 ~ 4059491 (-) | False | LOC113534503 |
| XM_026927360.2 | mRNA | upstream | 5114 | 4043045 ~ 4059478 (-) | True | LOC113534503 |
| XM_034301488.1 | mRNA | upstream | 68945 | 4106876 ~ 4117916 (-) | False | LOC113534511 |
| XM_034301487.1 | mRNA | upstream | 68945 | 4106876 ~ 4117916 (-) | False | LOC113534511 |
| XM_026927374.2 | mRNA | upstream | 68945 | 4106876 ~ 4117915 (-) | True | LOC113534511 |
| XR_003403536.1 | other | downstream | 563140 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 564012 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 613534 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473965 | other | downstream | 649011 | 3264713 ~ 3275955 (-) | False | G399489 |
| XR_003403516.2 | other | upstream | 86318 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_004577542.1 | other | upstream | 923171 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1549467 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 2135057 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 2333719 | 6371650 ~ 6374490 (-) | False | polr1h |
