Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474821 |
| length | 325 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G400133 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 4284049 ~ 4284393 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474819 | lncRNA | downstream | 2616 | 4280777 ~ 4281433 (-) | True | G400131 |
| TU474749 | lncRNA | downstream | 7567 | 4190741 ~ 4276482 (-) | True | G400085 |
| TU474649 | lncRNA | downstream | 129156 | 4153038 ~ 4154893 (-) | False | LOC113534684 |
| TU474609 | lncRNA | downstream | 177722 | 4100097 ~ 4106327 (-) | True | G399990 |
| TU474566 | lncRNA | downstream | 217769 | 4009067 ~ 4066280 (-) | True | G399950 |
| TU474783 | lncRNA | upstream | 6202 | 4290595 ~ 4293157 (-) | True | G400112 |
| TU474796 | lncRNA | upstream | 10823 | 4295216 ~ 4300512 (-) | False | maptb |
| TU474800 | lncRNA | upstream | 10823 | 4295216 ~ 4300512 (-) | False | maptb |
| TU475162 | lncRNA | upstream | 249448 | 4533841 ~ 4534131 (-) | True | G400428 |
| TU475167 | lncRNA | upstream | 274095 | 4558488 ~ 4562020 (-) | True | G400431 |
| XM_026927485.2 | mRNA | downstream | 96325 | 4179111 ~ 4187724 (-) | True | LOC113534587 |
| XM_034301461.1 | mRNA | downstream | 108895 | 4170470 ~ 4175154 (-) | True | LOC117596407 |
| XM_034301411.1 | mRNA | downstream | 115489 | 4166324 ~ 4168560 (-) | True | LOC117596393 |
| XM_034301460.1 | mRNA | downstream | 124299 | 4150899 ~ 4159750 (-) | True | LOC113534684 |
| XM_034301699.1 | mRNA | downstream | 139505 | 4134338 ~ 4144544 (-) | True | LOC113534634 |
| XM_026942401.2 | mRNA | upstream | 11453 | 4295846 ~ 4338427 (-) | False | maptb |
| XM_026942404.2 | mRNA | upstream | 11453 | 4295846 ~ 4337644 (-) | False | maptb |
| XM_026942407.2 | mRNA | upstream | 11453 | 4295846 ~ 4337632 (-) | False | maptb |
| XM_026942409.2 | mRNA | upstream | 11453 | 4295846 ~ 4337632 (-) | False | maptb |
| XM_026942408.2 | mRNA | upstream | 11453 | 4295846 ~ 4337632 (-) | False | maptb |
| XR_003403516.2 | other | downstream | 151127 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 922223 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 923095 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 972617 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473969 | other | downstream | 1008094 | 3273840 ~ 3275955 (-) | False | G399489 |
| XR_004577542.1 | other | upstream | 676709 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1303005 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 1888595 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 2087257 | 6371650 ~ 6374490 (-) | False | polr1h |
| XR_003404453.2 | other | upstream | 2151594 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
