Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU475168 |
| length | 1154 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G400432 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 4562211 ~ 4563364 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU475167 | lncRNA | downstream | 191 | 4558488 ~ 4562020 (-) | True | G400431 |
| TU475162 | lncRNA | downstream | 28080 | 4533841 ~ 4534131 (-) | True | G400428 |
| TU474796 | lncRNA | downstream | 261699 | 4295216 ~ 4300512 (-) | False | maptb |
| TU474800 | lncRNA | downstream | 261699 | 4295216 ~ 4300512 (-) | False | maptb |
| TU474783 | lncRNA | downstream | 269054 | 4290595 ~ 4293157 (-) | True | G400112 |
| TU475178 | lncRNA | upstream | 34436 | 4597800 ~ 4635057 (-) | False | polr3gla |
| TU475179 | lncRNA | upstream | 34436 | 4597800 ~ 4631283 (-) | False | polr3gla |
| TU475232 | lncRNA | upstream | 216247 | 4779611 ~ 4785657 (-) | False | G400477 |
| TU475233 | lncRNA | upstream | 218577 | 4781941 ~ 4785657 (-) | True | G400477 |
| XR_004577584.1 | lncRNA | upstream | 249297 | 4812661 ~ 4817295 (-) | True | LOC113543895 |
| XM_026942301.2 | mRNA | downstream | 8845 | 4534996 ~ 4553366 (-) | True | mtx1b |
| XM_026942284.2 | mRNA | downstream | 36804 | 4507481 ~ 4525407 (-) | True | thbs3b |
| XM_026942411.2 | mRNA | downstream | 61353 | 4497893 ~ 4500858 (-) | False | LOC113543882 |
| XM_034301720.1 | mRNA | downstream | 61353 | 4497893 ~ 4500858 (-) | True | LOC113543882 |
| XM_026942413.2 | mRNA | downstream | 70924 | 4488748 ~ 4491287 (-) | True | gh1 |
| XM_034301691.1 | mRNA | upstream | 35058 | 4598422 ~ 4602800 (-) | True | polr3gla |
| XM_034301692.1 | mRNA | upstream | 35058 | 4598422 ~ 4602790 (-) | False | polr3gla |
| XM_034301462.1 | mRNA | upstream | 104423 | 4667787 ~ 4691369 (-) | True | si:dkeyp-92c9.4 |
| XM_026942153.2 | mRNA | upstream | 131102 | 4694466 ~ 4706433 (-) | False | si:dkey-81h8.1 |
| XM_026942152.2 | mRNA | upstream | 131102 | 4694466 ~ 4706433 (-) | False | si:dkey-81h8.1 |
| XR_003403516.2 | other | downstream | 429289 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 1200385 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 1201257 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 1250779 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473969 | other | downstream | 1286256 | 3273840 ~ 3275955 (-) | False | G399489 |
| XR_004577542.1 | other | upstream | 397738 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1024034 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 1609624 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 1808286 | 6371650 ~ 6374490 (-) | False | polr1h |
| XR_003404453.2 | other | upstream | 1872623 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
