Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU475255 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G400494 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 4833754 ~ 4833983 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577584.1 | lncRNA | downstream | 16459 | 4812661 ~ 4817295 (-) | True | LOC113543895 |
| XR_003404450.2 | lncRNA | downstream | 16459 | 4813444 ~ 4817295 (-) | False | LOC113543895 |
| TU475232 | lncRNA | downstream | 48097 | 4779611 ~ 4785657 (-) | False | G400477 |
| TU475233 | lncRNA | downstream | 48097 | 4781941 ~ 4785657 (-) | True | G400477 |
| TU475178 | lncRNA | downstream | 198697 | 4597800 ~ 4635057 (-) | False | polr3gla |
| TU475268 | lncRNA | upstream | 47723 | 4881706 ~ 4884003 (-) | True | G400503 |
| TU475264 | lncRNA | upstream | 77367 | 4911350 ~ 4918883 (-) | False | G400500 |
| TU475265 | lncRNA | upstream | 77367 | 4911350 ~ 4918883 (-) | True | G400500 |
| TU475282 | lncRNA | upstream | 178204 | 5012187 ~ 5012795 (-) | True | G400517 |
| TU475266 | lncRNA | upstream | 196876 | 5030859 ~ 5035922 (-) | True | G400501 |
| XM_034301661.1 | mRNA | downstream | 85916 | 4709738 ~ 4747838 (-) | False | sema4ab |
| XM_034301662.1 | mRNA | downstream | 85916 | 4709738 ~ 4747838 (-) | True | sema4ab |
| XM_034301664.1 | mRNA | downstream | 88101 | 4709738 ~ 4745653 (-) | False | sema4ab |
| XM_026942153.2 | mRNA | downstream | 127321 | 4694466 ~ 4706433 (-) | False | si:dkey-81h8.1 |
| XM_026942294.2 | mRNA | upstream | 2867 | 4836850 ~ 4839788 (-) | True | pex11b |
| XM_026942249.2 | mRNA | upstream | 6920 | 4840903 ~ 4850568 (-) | True | rit1 |
| XM_026942104.2 | mRNA | upstream | 23237 | 4857220 ~ 4877644 (-) | True | syt11a |
| XM_034301766.1 | mRNA | upstream | 50615 | 4884598 ~ 4905395 (-) | True | si:dkey-222b8.1 |
| XM_026942109.2 | mRNA | upstream | 74543 | 4908526 ~ 4910977 (-) | True | snapin |
| XR_003403516.2 | other | downstream | 700832 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 1471928 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 1472800 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 1522322 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473969 | other | downstream | 1557799 | 3273840 ~ 3275955 (-) | False | G399489 |
| XR_004577542.1 | other | upstream | 127119 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 753415 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 1339005 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 1537667 | 6371650 ~ 6374490 (-) | False | polr1h |
| XR_003404453.2 | other | upstream | 1602004 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
