Item | Value |
---|---|
RNA id | TU476110 |
length | 954 |
lncRNA type | read_through |
GC content | 0.44 |
exon number | 2 |
gene id | G401230 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047623.1 |
NCBI id | CM018569.1 |
chromosome length | 15305753 |
location | 6096979 ~ 6187263 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU476060 | lncRNA | downstream | 75214 | 6021554 ~ 6021765 (-) | True | G401196 |
TU475958 | lncRNA | downstream | 125805 | 5907147 ~ 5971174 (-) | True | G401106 |
TU475747 | lncRNA | downstream | 284967 | 5811344 ~ 5812012 (-) | True | G400913 |
TU475654 | lncRNA | downstream | 509598 | 5583555 ~ 5587381 (-) | True | G400826 |
TU475475 | lncRNA | downstream | 716042 | 5371072 ~ 5380937 (-) | True | G400676 |
TU476142 | lncRNA | upstream | 710 | 6187973 ~ 6188409 (-) | True | G401243 |
TU476159 | lncRNA | upstream | 60193 | 6247456 ~ 6250036 (-) | True | G401259 |
TU476302 | lncRNA | upstream | 172491 | 6359754 ~ 6359977 (-) | True | G401388 |
TU476320 | lncRNA | upstream | 218043 | 6405306 ~ 6405878 (-) | True | G401403 |
XR_003404449.2 | lncRNA | upstream | 248268 | 6435531 ~ 6437074 (-) | True | LOC113543850 |
XM_026942101.2 | mRNA | downstream | 14795 | 6075576 ~ 6082184 (-) | False | csnk2b |
XM_034301528.1 | mRNA | downstream | 14879 | 6075576 ~ 6082100 (-) | True | csnk2b |
XM_026942333.2 | mRNA | downstream | 250701 | 5813904 ~ 5846278 (-) | True | dtnbp1b |
XM_026942332.2 | mRNA | downstream | 261942 | 5813904 ~ 5835037 (-) | False | dtnbp1b |
XM_026942331.2 | mRNA | downstream | 261942 | 5813904 ~ 5835037 (-) | False | dtnbp1b |
XM_026942293.2 | mRNA | upstream | 1829 | 6189092 ~ 6208987 (-) | True | sacm1la |
XM_026942212.2 | mRNA | upstream | 40590 | 6227853 ~ 6337451 (-) | False | gabbr1b |
XM_026942211.2 | mRNA | upstream | 40590 | 6227853 ~ 6337451 (-) | True | gabbr1b |
XM_026942445.2 | mRNA | upstream | 162622 | 6349885 ~ 6357426 (-) | True | sh3bp5lb |
XM_026942116.2 | mRNA | upstream | 173362 | 6360625 ~ 6370712 (-) | True | gtf2h4 |
TU475643 | other | downstream | 507232 | 5587398 ~ 5589747 (-) | True | G400815 |
XR_004577542.1 | other | downstream | 1088518 | 4961102 ~ 5008461 (-) | False | sept7a |
XR_003403516.2 | other | downstream | 1964057 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
XR_003403536.1 | other | downstream | 2735153 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
XR_003403535.2 | other | downstream | 2736025 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
TU476305 | other | upstream | 184387 | 6371650 ~ 6374490 (-) | False | polr1h |
XR_003404453.2 | other | upstream | 248724 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
TU476702 | other | upstream | 1074077 | 7261340 ~ 7276644 (-) | False | fndc5b |
TU477767 | other | upstream | 2961248 | 9148511 ~ 9161470 (-) | False | G402673 |
XR_004577570.1 | other | upstream | 3040132 | 9227395 ~ 9251794 (-) | False | runx1t1 |