Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476305 |
| length | 682 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 5 |
| gene id | polr1h |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 6371617 ~ 6374500 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476302 | lncRNA | downstream | 11673 | 6359754 ~ 6359977 (-) | True | G401388 |
| TU476159 | lncRNA | downstream | 121614 | 6247456 ~ 6250036 (-) | True | G401259 |
| TU476142 | lncRNA | downstream | 183241 | 6187973 ~ 6188409 (-) | True | G401243 |
| TU476110 | lncRNA | downstream | 184387 | 6096979 ~ 6187263 (-) | True | G401230 |
| TU476060 | lncRNA | downstream | 349885 | 6021554 ~ 6021765 (-) | True | G401196 |
| TU476320 | lncRNA | upstream | 30816 | 6405306 ~ 6405878 (-) | True | G401403 |
| XR_003404449.2 | lncRNA | upstream | 61041 | 6435531 ~ 6437074 (-) | True | LOC113543850 |
| TU476306 | lncRNA | upstream | 61050 | 6435540 ~ 6437028 (-) | False | LOC113543850 |
| TU476428 | lncRNA | upstream | 191547 | 6566037 ~ 6567293 (-) | True | G401482 |
| XR_004577578.1 | lncRNA | upstream | 204538 | 6579028 ~ 6581192 (-) | True | LOC117596453 |
| XM_026942116.2 | mRNA | downstream | 938 | 6360625 ~ 6370712 (-) | True | gtf2h4 |
| XM_026942445.2 | mRNA | downstream | 14224 | 6349885 ~ 6357426 (-) | True | sh3bp5lb |
| XM_026942212.2 | mRNA | downstream | 34199 | 6227853 ~ 6337451 (-) | False | gabbr1b |
| XM_026942211.2 | mRNA | downstream | 34199 | 6227853 ~ 6337451 (-) | True | gabbr1b |
| XM_026942293.2 | mRNA | downstream | 162663 | 6189092 ~ 6208987 (-) | True | sacm1la |
| XM_026942250.2 | mRNA | upstream | 18479 | 6392969 ~ 6405009 (-) | True | mgat1b |
| XM_026942252.2 | mRNA | upstream | 18479 | 6392969 ~ 6403928 (-) | False | mgat1b |
| XM_026942253.2 | mRNA | upstream | 18479 | 6392969 ~ 6403924 (-) | False | mgat1b |
| XM_026942448.2 | mRNA | upstream | 31616 | 6406106 ~ 6422826 (-) | False | vars2 |
| XM_026942447.2 | mRNA | upstream | 31616 | 6406106 ~ 6422826 (-) | True | vars2 |
| TU476079 | other | downstream | 196390 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU475643 | other | downstream | 781903 | 5587398 ~ 5589747 (-) | True | G400815 |
| XR_004577542.1 | other | downstream | 1363189 | 4961102 ~ 5008461 (-) | False | sept7a |
| XR_003403516.2 | other | downstream | 2238728 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 3009824 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003404453.2 | other | upstream | 61497 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| TU476702 | other | upstream | 886850 | 7261340 ~ 7276644 (-) | False | fndc5b |
| TU477767 | other | upstream | 2774021 | 9148511 ~ 9161470 (-) | False | G402673 |
| XR_004577570.1 | other | upstream | 2852905 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XR_003404456.1 | other | upstream | 3002436 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
