Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476481 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G401526 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 6742057 ~ 6742274 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476437 | lncRNA | downstream | 147117 | 6594708 ~ 6594940 (-) | True | G401491 |
| TU476432 | lncRNA | downstream | 155483 | 6585853 ~ 6586574 (-) | True | G401486 |
| XR_004577578.1 | lncRNA | downstream | 160865 | 6579028 ~ 6581192 (-) | True | LOC117596453 |
| TU476428 | lncRNA | downstream | 174764 | 6566037 ~ 6567293 (-) | True | G401482 |
| XR_003404449.2 | lncRNA | downstream | 304983 | 6435531 ~ 6437074 (-) | True | LOC113543850 |
| TU476488 | lncRNA | upstream | 6719 | 6748993 ~ 6749232 (-) | True | G401531 |
| TU476518 | lncRNA | upstream | 27258 | 6769532 ~ 6769734 (-) | True | G401558 |
| TU476559 | lncRNA | upstream | 178356 | 6920630 ~ 6980575 (-) | False | G401577 |
| TU476554 | lncRNA | upstream | 198253 | 6940527 ~ 6980575 (-) | True | G401577 |
| TU476697 | lncRNA | upstream | 506050 | 7248324 ~ 7248560 (-) | True | G401690 |
| XM_026942343.2 | mRNA | downstream | 58562 | 6679309 ~ 6683495 (-) | True | irx1b |
| XM_026942124.2 | mRNA | downstream | 131118 | 6598286 ~ 6610939 (-) | True | ube2ql1 |
| XM_026942444.2 | mRNA | downstream | 178425 | 6555953 ~ 6563632 (-) | True | srd5a1 |
| XM_034301568.1 | mRNA | downstream | 187066 | 6538616 ~ 6554991 (-) | False | tent4a |
| XM_026942327.2 | mRNA | upstream | 448 | 6742722 ~ 6745462 (-) | True | ndufs6 |
| XM_026942374.2 | mRNA | upstream | 33705 | 6775979 ~ 6780923 (-) | True | nrsn1l |
| XM_026942102.2 | mRNA | upstream | 236785 | 6979059 ~ 6980290 (-) | True | sox4a |
| XM_026942389.2 | mRNA | upstream | 456087 | 7198361 ~ 7205064 (-) | True | e2f3 |
| XM_026942106.2 | mRNA | upstream | 465271 | 7207545 ~ 7213295 (-) | True | srfbp1 |
| XR_003404453.2 | other | downstream | 306009 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| TU476305 | other | downstream | 367567 | 6371650 ~ 6374490 (-) | False | polr1h |
| TU476079 | other | downstream | 566797 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU475643 | other | downstream | 1152310 | 5587398 ~ 5589747 (-) | True | G400815 |
| XR_004577542.1 | other | downstream | 1733596 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU476702 | other | upstream | 519066 | 7261340 ~ 7276644 (-) | False | fndc5b |
| TU477767 | other | upstream | 2406237 | 9148511 ~ 9161470 (-) | False | G402673 |
| XR_004577570.1 | other | upstream | 2485121 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XR_003404456.1 | other | upstream | 2634652 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| TU477891 | other | upstream | 2644728 | 9387002 ~ 9416207 (-) | False | triqk |
