Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476488 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G401531 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 6748993 ~ 6749232 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476481 | lncRNA | downstream | 6719 | 6742057 ~ 6742274 (-) | True | G401526 |
| TU476437 | lncRNA | downstream | 154053 | 6594708 ~ 6594940 (-) | True | G401491 |
| TU476432 | lncRNA | downstream | 162419 | 6585853 ~ 6586574 (-) | True | G401486 |
| XR_004577578.1 | lncRNA | downstream | 167801 | 6579028 ~ 6581192 (-) | True | LOC117596453 |
| TU476428 | lncRNA | downstream | 181700 | 6566037 ~ 6567293 (-) | True | G401482 |
| TU476518 | lncRNA | upstream | 20300 | 6769532 ~ 6769734 (-) | True | G401558 |
| TU476559 | lncRNA | upstream | 171398 | 6920630 ~ 6980575 (-) | False | G401577 |
| TU476554 | lncRNA | upstream | 191295 | 6940527 ~ 6980575 (-) | True | G401577 |
| TU476697 | lncRNA | upstream | 499092 | 7248324 ~ 7248560 (-) | True | G401690 |
| TU476698 | lncRNA | upstream | 499716 | 7248948 ~ 7250340 (-) | True | G401691 |
| XM_026942327.2 | mRNA | downstream | 3531 | 6742722 ~ 6745462 (-) | True | ndufs6 |
| XM_026942343.2 | mRNA | downstream | 65498 | 6679309 ~ 6683495 (-) | True | irx1b |
| XM_026942124.2 | mRNA | downstream | 138054 | 6598286 ~ 6610939 (-) | True | ube2ql1 |
| XM_026942444.2 | mRNA | downstream | 185361 | 6555953 ~ 6563632 (-) | True | srd5a1 |
| XM_034301570.1 | mRNA | downstream | 194002 | 6538616 ~ 6554991 (-) | False | tent4a |
| XM_026942374.2 | mRNA | upstream | 26747 | 6775979 ~ 6780923 (-) | True | nrsn1l |
| XM_026942102.2 | mRNA | upstream | 229827 | 6979059 ~ 6980290 (-) | True | sox4a |
| XM_026942389.2 | mRNA | upstream | 449129 | 7198361 ~ 7205064 (-) | True | e2f3 |
| XM_026942106.2 | mRNA | upstream | 458313 | 7207545 ~ 7213295 (-) | True | srfbp1 |
| XM_034301687.1 | mRNA | upstream | 505201 | 7254433 ~ 7276782 (-) | True | fndc5b |
| XR_003404453.2 | other | downstream | 312945 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| TU476305 | other | downstream | 374503 | 6371650 ~ 6374490 (-) | False | polr1h |
| TU476079 | other | downstream | 573733 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU475643 | other | downstream | 1159246 | 5587398 ~ 5589747 (-) | True | G400815 |
| XR_004577542.1 | other | downstream | 1740532 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU476702 | other | upstream | 512108 | 7261340 ~ 7276644 (-) | False | fndc5b |
| TU477767 | other | upstream | 2399279 | 9148511 ~ 9161470 (-) | False | G402673 |
| XR_004577570.1 | other | upstream | 2478163 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XR_003404456.1 | other | upstream | 2627694 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| TU477891 | other | upstream | 2637770 | 9387002 ~ 9416207 (-) | False | triqk |
