Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476827 |
| length | 613 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G401812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 7738610 ~ 7739244 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476826 | lncRNA | downstream | 168 | 7735631 ~ 7738442 (-) | True | G401811 |
| TU476830 | lncRNA | downstream | 30419 | 7707862 ~ 7708191 (-) | True | G401815 |
| TU476768 | lncRNA | downstream | 170863 | 7567533 ~ 7567747 (-) | True | G401758 |
| TU476750 | lncRNA | downstream | 302204 | 7433787 ~ 7436406 (-) | True | G401742 |
| TU476699 | lncRNA | downstream | 477396 | 7257850 ~ 7261214 (-) | False | fndc5b |
| TU476828 | lncRNA | upstream | 105 | 7739349 ~ 7741757 (-) | True | G401813 |
| TU476858 | lncRNA | upstream | 76755 | 7815999 ~ 7827663 (-) | True | G401835 |
| TU476884 | lncRNA | upstream | 130159 | 7869403 ~ 7917693 (-) | False | tmem64 |
| TU477149 | lncRNA | upstream | 582912 | 8322156 ~ 8323077 (-) | False | G402090 |
| TU477147 | lncRNA | upstream | 583275 | 8322519 ~ 8324199 (-) | True | G402090 |
| XM_026942190.2 | mRNA | downstream | 237397 | 7481825 ~ 7501213 (-) | True | kpna6 |
| XM_034301501.1 | mRNA | downstream | 261632 | 7467045 ~ 7476978 (-) | True | txlna |
| XM_034301502.1 | mRNA | downstream | 261692 | 7467045 ~ 7476918 (-) | False | txlna |
| XM_026942118.2 | mRNA | downstream | 274152 | 7453738 ~ 7464458 (-) | True | eif3i |
| XM_034301687.1 | mRNA | downstream | 461828 | 7254433 ~ 7276782 (-) | True | fndc5b |
| XM_026942265.2 | mRNA | upstream | 5580 | 7744824 ~ 7756061 (-) | True | khdrbs1b |
| XM_026942299.2 | mRNA | upstream | 42671 | 7781915 ~ 7784061 (-) | True | agr2 |
| XM_026942300.2 | mRNA | upstream | 42671 | 7781915 ~ 7783937 (-) | False | agr2 |
| XM_026942288.2 | mRNA | upstream | 49665 | 7788909 ~ 7798665 (-) | False | ppp1r10 |
| XM_034301499.1 | mRNA | upstream | 49665 | 7788909 ~ 7798665 (-) | False | ppp1r10 |
| TU476702 | other | downstream | 461966 | 7261340 ~ 7276644 (-) | False | fndc5b |
| XR_003404453.2 | other | downstream | 1302562 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| TU476305 | other | downstream | 1364120 | 6371650 ~ 6374490 (-) | False | polr1h |
| TU476079 | other | downstream | 1563350 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU475643 | other | downstream | 2148863 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU477767 | other | upstream | 1409267 | 9148511 ~ 9161470 (-) | False | G402673 |
| XR_004577570.1 | other | upstream | 1488151 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XR_003404456.1 | other | upstream | 1637682 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| TU477891 | other | upstream | 1647758 | 9387002 ~ 9416207 (-) | False | triqk |
| XR_004577593.1 | other | upstream | 2764045 | 10503289 ~ 10503361 (-) | True | LOC117596479 |
