Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942443.2 |
| length | 1275 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | triqk |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 9386995 ~ 9416253 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU477769 | lncRNA | downstream | 225525 | 9143870 ~ 9161470 (-) | True | G402673 |
| TU477770 | lncRNA | downstream | 245172 | 9139017 ~ 9141823 (-) | True | G402674 |
| TU477491 | lncRNA | downstream | 772191 | 8612118 ~ 8614804 (-) | True | G402405 |
| TU477221 | lncRNA | downstream | 864951 | 8521358 ~ 8522044 (-) | True | G402142 |
| TU477192 | lncRNA | downstream | 878869 | 8449495 ~ 8508126 (-) | True | G402129 |
| TU478003 | lncRNA | upstream | 203877 | 9620130 ~ 9620599 (-) | True | G402892 |
| TU478213 | lncRNA | upstream | 314430 | 9730683 ~ 9731257 (-) | True | G403080 |
| TU478200 | lncRNA | upstream | 343392 | 9759645 ~ 9760497 (-) | True | G403072 |
| TU478220 | lncRNA | upstream | 348421 | 9764674 ~ 9764904 (-) | True | G403086 |
| TU478269 | lncRNA | upstream | 446780 | 9863033 ~ 9863314 (-) | True | G403134 |
| XM_034301689.1 | mRNA | downstream | 102502 | 9227395 ~ 9284493 (-) | True | runx1t1 |
| XM_034301690.1 | mRNA | downstream | 117595 | 9227395 ~ 9269400 (-) | False | runx1t1 |
| XM_026942283.2 | mRNA | downstream | 135201 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XM_034301688.1 | mRNA | downstream | 135201 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| XM_034301651.1 | mRNA | downstream | 381664 | 8615005 ~ 9005331 (-) | True | adgrb2 |
| XM_026942344.2 | mRNA | upstream | 164959 | 9581212 ~ 9582892 (-) | True | lratd2a |
| XM_026942383.2 | mRNA | upstream | 170055 | 9586308 ~ 9612307 (-) | True | fam91a1 |
| XM_026942183.2 | mRNA | upstream | 211040 | 9627293 ~ 9669455 (-) | False | spire1a |
| XM_026942182.2 | mRNA | upstream | 211040 | 9627293 ~ 9669455 (-) | False | spire1a |
| XM_026942181.2 | mRNA | upstream | 211040 | 9627293 ~ 9669455 (-) | False | spire1a |
| XR_003404456.1 | other | downstream | 9956 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| XR_004577570.1 | other | downstream | 135201 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| TU477767 | other | downstream | 225525 | 9148511 ~ 9161470 (-) | False | G402673 |
| TU476702 | other | downstream | 2110351 | 7261340 ~ 7276644 (-) | False | fndc5b |
| XR_003404453.2 | other | downstream | 2950947 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| XR_004577593.1 | other | upstream | 1087036 | 10503289 ~ 10503361 (-) | True | LOC117596479 |
| XR_003404458.1 | other | upstream | 1087540 | 10503793 ~ 10503874 (-) | True | LOC113543917 |
| XR_003404460.2 | other | upstream | 1087935 | 10504188 ~ 10504325 (-) | True | LOC113543919 |
| XR_003404459.1 | other | upstream | 1088795 | 10505048 ~ 10505185 (-) | True | LOC113543918 |
| trnaa-ugc_19 | other | upstream | 2024411 | 11440664 ~ 11440735 (-) | True | trnaa-ugc_19 |
