Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU478269 |
| length | 282 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G403134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 9863033 ~ 9863314 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU478220 | lncRNA | downstream | 98129 | 9764674 ~ 9764904 (-) | True | G403086 |
| TU478200 | lncRNA | downstream | 102536 | 9759645 ~ 9760497 (-) | True | G403072 |
| TU478213 | lncRNA | downstream | 131776 | 9730683 ~ 9731257 (-) | True | G403080 |
| TU478003 | lncRNA | downstream | 242434 | 9620130 ~ 9620599 (-) | True | G402892 |
| TU477769 | lncRNA | downstream | 701563 | 9143870 ~ 9161470 (-) | True | G402673 |
| TU478299 | lncRNA | upstream | 33582 | 9896896 ~ 9897124 (-) | True | G403164 |
| TU478437 | lncRNA | upstream | 71675 | 9934989 ~ 9952324 (-) | True | G403262 |
| TU478499 | lncRNA | upstream | 227255 | 10090569 ~ 10094630 (-) | True | G403316 |
| TU478508 | lncRNA | upstream | 319523 | 10182837 ~ 10183568 (-) | True | G403323 |
| TU478510 | lncRNA | upstream | 325857 | 10189171 ~ 10191189 (-) | True | G403324 |
| XM_026942280.2 | mRNA | downstream | 38581 | 9760884 ~ 9824452 (-) | False | LOC113543808 |
| XM_026942436.2 | mRNA | downstream | 151926 | 9701804 ~ 9711107 (-) | True | adnp2b |
| XM_026942147.2 | mRNA | downstream | 163004 | 9696064 ~ 9700029 (-) | True | txnl4a |
| XM_026942185.2 | mRNA | downstream | 169845 | 9681913 ~ 9693188 (-) | False | atp6v1c1b |
| XM_026942184.2 | mRNA | downstream | 169845 | 9681913 ~ 9693188 (-) | True | atp6v1c1b |
| XM_034301578.1 | mRNA | upstream | 191704 | 10055018 ~ 10069626 (-) | True | nr1d2b |
| XM_026942198.2 | mRNA | upstream | 191704 | 10055018 ~ 10069623 (-) | False | nr1d2b |
| XM_026942240.2 | mRNA | upstream | 217172 | 10080486 ~ 10084170 (-) | True | rpl15 |
| XM_026942286.2 | mRNA | upstream | 232810 | 10096124 ~ 10113933 (-) | False | ube2e1 |
| XM_026942287.2 | mRNA | upstream | 232810 | 10096124 ~ 10113516 (-) | True | ube2e1 |
| TU477891 | other | downstream | 446826 | 9387002 ~ 9416207 (-) | False | triqk |
| XR_003404456.1 | other | downstream | 485994 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| XR_004577570.1 | other | downstream | 611239 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| TU477767 | other | downstream | 701563 | 9148511 ~ 9161470 (-) | False | G402673 |
| TU476702 | other | downstream | 2586389 | 7261340 ~ 7276644 (-) | False | fndc5b |
| XR_004577593.1 | other | upstream | 639975 | 10503289 ~ 10503361 (-) | True | LOC117596479 |
| XR_003404458.1 | other | upstream | 640479 | 10503793 ~ 10503874 (-) | True | LOC113543917 |
| XR_003404460.2 | other | upstream | 640874 | 10504188 ~ 10504325 (-) | True | LOC113543919 |
| XR_003404459.1 | other | upstream | 641734 | 10505048 ~ 10505185 (-) | True | LOC113543918 |
| trnaa-ugc_19 | other | upstream | 1577350 | 11440664 ~ 11440735 (-) | True | trnaa-ugc_19 |
