Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU479573 |
| length | 377 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G404198 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 11821050 ~ 11821426 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479539 | lncRNA | downstream | 30885 | 11789319 ~ 11790165 (-) | False | si:ch73-347e22.4 |
| TU479385 | lncRNA | downstream | 55283 | 11763111 ~ 11765767 (-) | True | G404060 |
| TU479300 | lncRNA | downstream | 124859 | 11668763 ~ 11696191 (-) | False | G403981 |
| TU479616 | lncRNA | upstream | 149316 | 11970742 ~ 11970964 (-) | True | G404235 |
| TU479622 | lncRNA | upstream | 175644 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU479624 | lncRNA | upstream | 178840 | 12000266 ~ 12000510 (-) | True | G404243 |
| TU479664 | lncRNA | upstream | 304031 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479760 | lncRNA | upstream | 324657 | 12146083 ~ 12147663 (-) | False | grin2da |
| XM_034301427.1 | mRNA | downstream | 11269 | 11799496 ~ 11809781 (-) | False | LOC113543858 |
| XM_026942360.2 | mRNA | downstream | 20312 | 11799496 ~ 11800738 (-) | True | LOC113543858 |
| XM_026942361.2 | mRNA | downstream | 20323 | 11799496 ~ 11800727 (-) | False | LOC113543858 |
| XM_026942107.2 | mRNA | downstream | 26633 | 11792220 ~ 11794417 (-) | True | apoea |
| XM_026942200.2 | mRNA | downstream | 30871 | 11778027 ~ 11790179 (-) | True | si:ch73-347e22.4 |
| XM_026928288.2 | mRNA | upstream | 10780 | 11832206 ~ 11842945 (-) | True | tomm40l |
| XM_034301426.1 | mRNA | upstream | 10780 | 11832206 ~ 11842609 (-) | False | tomm40l |
| XM_026928125.2 | mRNA | upstream | 23127 | 11844553 ~ 11863767 (-) | False | LOC113535038 |
| XM_026928124.2 | mRNA | upstream | 23127 | 11844553 ~ 11863767 (-) | False | LOC113535038 |
| XM_026928123.2 | mRNA | upstream | 23127 | 11844553 ~ 11863767 (-) | False | LOC113535038 |
| trnay-gua_19 | other | downstream | 86 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 1579 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnay-gua_17 | other | downstream | 3076 | 11817887 ~ 11817974 (-) | True | trnay-gua_17 |
| trnay-gua_16 | other | downstream | 4580 | 11816383 ~ 11816470 (-) | True | trnay-gua_16 |
| trnay-gua_15 | other | downstream | 6078 | 11814885 ~ 11814972 (-) | True | trnay-gua_15 |
| trnay-gua_20 | other | upstream | 951 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_21 | other | upstream | 2450 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| TU480085 | other | upstream | 609569 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnav-cac_22 | other | upstream | 749038 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 750167 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
