Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU479616 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G404235 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 11970742 ~ 11970964 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479573 | lncRNA | downstream | 149316 | 11821050 ~ 11821426 (-) | True | G404198 |
| TU479539 | lncRNA | downstream | 180577 | 11789319 ~ 11790165 (-) | False | si:ch73-347e22.4 |
| TU479385 | lncRNA | downstream | 204975 | 11763111 ~ 11765767 (-) | True | G404060 |
| TU479297 | lncRNA | downstream | 274551 | 11691704 ~ 11696191 (-) | False | G403981 |
| TU479299 | lncRNA | downstream | 282369 | 11671667 ~ 11688373 (-) | True | G403981 |
| TU479622 | lncRNA | upstream | 26106 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU479624 | lncRNA | upstream | 29302 | 12000266 ~ 12000510 (-) | True | G404243 |
| TU479664 | lncRNA | upstream | 154493 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479760 | lncRNA | upstream | 175119 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479803 | lncRNA | upstream | 304304 | 12275268 ~ 12275502 (-) | True | G404421 |
| XM_034301695.1 | mRNA | downstream | 32321 | 11911671 ~ 11938421 (-) | False | ago3b |
| XM_034301694.1 | mRNA | downstream | 32321 | 11911671 ~ 11938421 (-) | True | ago3b |
| XM_026928241.2 | mRNA | downstream | 88233 | 11867632 ~ 11882509 (-) | True | lipea |
| XM_026928125.2 | mRNA | downstream | 106975 | 11844553 ~ 11863767 (-) | False | LOC113535038 |
| XM_026928124.2 | mRNA | downstream | 106975 | 11844553 ~ 11863767 (-) | False | LOC113535038 |
| XM_034301735.1 | mRNA | upstream | 12230 | 11983194 ~ 11995992 (-) | True | usf2 |
| XM_026928346.2 | mRNA | upstream | 30052 | 12001016 ~ 12004480 (-) | True | LOC113535156 |
| XM_034301698.1 | mRNA | upstream | 30052 | 12001016 ~ 12004444 (-) | False | LOC113535156 |
| XM_026928212.2 | mRNA | upstream | 57257 | 12028221 ~ 12059395 (-) | True | slc2a3a |
| XM_034301514.1 | mRNA | upstream | 101960 | 12072924 ~ 12084163 (-) | True | si:dkey-14o18.2 |
| trnay-gua_21 | other | downstream | 146779 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 148278 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 149778 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 151271 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnay-gua_17 | other | downstream | 152768 | 11817887 ~ 11817974 (-) | True | trnay-gua_17 |
| TU480085 | other | upstream | 460031 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnav-cac_22 | other | upstream | 599500 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 600629 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 602635 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 603776 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
