Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU479624 |
| length | 245 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G404243 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12000266 ~ 12000510 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479622 | lncRNA | downstream | 2796 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU479616 | lncRNA | downstream | 29302 | 11970742 ~ 11970964 (-) | True | G404235 |
| TU479573 | lncRNA | downstream | 178840 | 11821050 ~ 11821426 (-) | True | G404198 |
| TU479539 | lncRNA | downstream | 210101 | 11789319 ~ 11790165 (-) | False | si:ch73-347e22.4 |
| TU479385 | lncRNA | downstream | 234499 | 11763111 ~ 11765767 (-) | True | G404060 |
| TU479664 | lncRNA | upstream | 124947 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479760 | lncRNA | upstream | 145573 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479803 | lncRNA | upstream | 274758 | 12275268 ~ 12275502 (-) | True | G404421 |
| TU480108 | lncRNA | upstream | 513961 | 12514471 ~ 12515210 (-) | True | G404667 |
| TU480079 | lncRNA | upstream | 535837 | 12536347 ~ 12553725 (-) | False | fam131ba |
| XM_034301735.1 | mRNA | downstream | 4274 | 11983194 ~ 11995992 (-) | True | usf2 |
| XM_034301695.1 | mRNA | downstream | 61845 | 11911671 ~ 11938421 (-) | False | ago3b |
| XM_034301694.1 | mRNA | downstream | 61845 | 11911671 ~ 11938421 (-) | True | ago3b |
| XM_026928241.2 | mRNA | downstream | 117757 | 11867632 ~ 11882509 (-) | True | lipea |
| XM_026928122.2 | mRNA | downstream | 136499 | 11844553 ~ 11863767 (-) | True | LOC113535038 |
| XM_026928346.2 | mRNA | upstream | 506 | 12001016 ~ 12004480 (-) | True | LOC113535156 |
| XM_034301698.1 | mRNA | upstream | 506 | 12001016 ~ 12004444 (-) | False | LOC113535156 |
| XM_026928212.2 | mRNA | upstream | 27711 | 12028221 ~ 12059395 (-) | True | slc2a3a |
| XM_034301514.1 | mRNA | upstream | 72414 | 12072924 ~ 12084163 (-) | True | si:dkey-14o18.2 |
| XM_026928300.2 | mRNA | upstream | 107388 | 12107898 ~ 12119870 (-) | True | cacng8a |
| trnay-gua_21 | other | downstream | 176303 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 177802 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 179302 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 180795 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnay-gua_17 | other | downstream | 182292 | 11817887 ~ 11817974 (-) | True | trnay-gua_17 |
| TU480085 | other | upstream | 430485 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnav-cac_22 | other | upstream | 569954 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 571083 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 573089 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 574230 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
