Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU479803 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G404421 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12275268 ~ 12275502 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479760 | lncRNA | downstream | 127605 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479664 | lncRNA | downstream | 149428 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479624 | lncRNA | downstream | 274758 | 12000266 ~ 12000510 (-) | True | G404243 |
| TU479622 | lncRNA | downstream | 277798 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU479616 | lncRNA | downstream | 304304 | 11970742 ~ 11970964 (-) | True | G404235 |
| TU480108 | lncRNA | upstream | 238969 | 12514471 ~ 12515210 (-) | True | G404667 |
| TU480079 | lncRNA | upstream | 260845 | 12536347 ~ 12553725 (-) | False | fam131ba |
| TU480124 | lncRNA | upstream | 299578 | 12575080 ~ 12577284 (-) | True | G404681 |
| TU480125 | lncRNA | upstream | 301030 | 12576532 ~ 12578806 (-) | True | G404682 |
| TU480131 | lncRNA | upstream | 313770 | 12589272 ~ 12591533 (-) | True | G404687 |
| XM_034301705.1 | mRNA | downstream | 18896 | 12148859 ~ 12256372 (-) | False | grin2da |
| XM_034301703.1 | mRNA | downstream | 18897 | 12145598 ~ 12256371 (-) | False | grin2da |
| XM_034301704.1 | mRNA | downstream | 18897 | 12145598 ~ 12256371 (-) | True | grin2da |
| XM_026928300.2 | mRNA | downstream | 155398 | 12107898 ~ 12119870 (-) | True | cacng8a |
| XM_034301514.1 | mRNA | downstream | 191105 | 12072924 ~ 12084163 (-) | True | si:dkey-14o18.2 |
| XM_026928333.2 | mRNA | upstream | 16240 | 12291742 ~ 12307057 (-) | True | dbpa |
| XM_034301544.1 | mRNA | upstream | 33293 | 12308795 ~ 12317891 (-) | True | znf865 |
| XM_034301807.1 | mRNA | upstream | 53656 | 12329158 ~ 12348572 (-) | False | shisa7b |
| XM_026927829.2 | mRNA | upstream | 53656 | 12329158 ~ 12348571 (-) | True | shisa7b |
| XM_026928119.2 | mRNA | upstream | 79740 | 12355242 ~ 12391362 (-) | True | cnot3b |
| trnay-gua_21 | other | downstream | 451305 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 452804 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 454304 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 455797 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnay-gua_17 | other | downstream | 457294 | 11817887 ~ 11817974 (-) | True | trnay-gua_17 |
| TU480085 | other | upstream | 155493 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnav-cac_22 | other | upstream | 294962 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 296091 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 298097 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 299238 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
