Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU480085 |
| length | 373 |
| RNA type | TUCP |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G404644 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12430995 ~ 12483898 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479803 | lncRNA | downstream | 155493 | 12275268 ~ 12275502 (-) | True | G404421 |
| TU479760 | lncRNA | downstream | 283332 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479664 | lncRNA | downstream | 305155 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479624 | lncRNA | downstream | 430485 | 12000266 ~ 12000510 (-) | True | G404243 |
| TU479622 | lncRNA | downstream | 433525 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU480108 | lncRNA | upstream | 30573 | 12514471 ~ 12515210 (-) | True | G404667 |
| TU480079 | lncRNA | upstream | 52449 | 12536347 ~ 12553725 (-) | False | fam131ba |
| TU480124 | lncRNA | upstream | 91182 | 12575080 ~ 12577284 (-) | True | G404681 |
| TU480125 | lncRNA | upstream | 92634 | 12576532 ~ 12578806 (-) | True | G404682 |
| TU480131 | lncRNA | upstream | 105374 | 12589272 ~ 12591533 (-) | True | G404687 |
| XM_026927850.2 | mRNA | downstream | 3606 | 12420503 ~ 12427389 (-) | True | ccdc106b |
| XM_034301648.1 | mRNA | downstream | 16203 | 12399540 ~ 12414792 (-) | False | u2af2b |
| XM_026928271.2 | mRNA | downstream | 16215 | 12399540 ~ 12414780 (-) | False | u2af2b |
| XM_026928272.2 | mRNA | downstream | 16217 | 12399540 ~ 12414778 (-) | False | u2af2b |
| XM_034301649.1 | mRNA | downstream | 16218 | 12399540 ~ 12414777 (-) | True | u2af2b |
| XM_026928401.2 | mRNA | upstream | 31418 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928400.2 | mRNA | upstream | 31418 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928399.2 | mRNA | upstream | 31418 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928398.2 | mRNA | upstream | 31418 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928397.2 | mRNA | upstream | 31418 | 12515316 ~ 12553760 (-) | True | fam131ba |
| trnay-gua_21 | other | downstream | 607032 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 608531 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 610031 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 611524 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnay-gua_17 | other | downstream | 613021 | 11817887 ~ 11817974 (-) | True | trnay-gua_17 |
| trnav-cac_22 | other | upstream | 86566 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 87695 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 89701 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 90842 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
| trnav-aac_25 | other | upstream | 92834 | 12576732 ~ 12576804 (-) | True | trnav-aac_25 |
