Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU480108 |
| length | 740 |
| lncRNA type | inter_gene |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G404667 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12514471 ~ 12515210 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479803 | lncRNA | downstream | 238969 | 12275268 ~ 12275502 (-) | True | G404421 |
| TU479760 | lncRNA | downstream | 366808 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479664 | lncRNA | downstream | 388631 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU479624 | lncRNA | downstream | 513961 | 12000266 ~ 12000510 (-) | True | G404243 |
| TU479622 | lncRNA | downstream | 517001 | 11997070 ~ 11997470 (-) | True | G404241 |
| TU480079 | lncRNA | upstream | 21137 | 12536347 ~ 12553725 (-) | False | fam131ba |
| TU480124 | lncRNA | upstream | 59870 | 12575080 ~ 12577284 (-) | True | G404681 |
| TU480125 | lncRNA | upstream | 61322 | 12576532 ~ 12578806 (-) | True | G404682 |
| TU480131 | lncRNA | upstream | 74062 | 12589272 ~ 12591533 (-) | True | G404687 |
| TU480136 | lncRNA | upstream | 86422 | 12601632 ~ 12635213 (-) | True | G404692 |
| XM_034301442.1 | mRNA | downstream | 32329 | 12465737 ~ 12482142 (-) | True | styk1a |
| XM_026927862.2 | mRNA | downstream | 52115 | 12447738 ~ 12462356 (-) | True | zgc:194578 |
| XM_034301702.1 | mRNA | downstream | 74124 | 12434972 ~ 12440347 (-) | False | si:ch211-232m10.6 |
| XM_026928356.2 | mRNA | downstream | 74124 | 12434972 ~ 12440347 (-) | False | si:ch211-232m10.6 |
| XM_026928355.2 | mRNA | downstream | 74124 | 12434972 ~ 12440347 (-) | True | si:ch211-232m10.6 |
| XM_026928401.2 | mRNA | upstream | 106 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928400.2 | mRNA | upstream | 106 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928399.2 | mRNA | upstream | 106 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928398.2 | mRNA | upstream | 106 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928397.2 | mRNA | upstream | 106 | 12515316 ~ 12553760 (-) | True | fam131ba |
| TU480085 | other | downstream | 30573 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnay-gua_21 | other | downstream | 690508 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 692007 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 693507 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 695000 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnav-cac_22 | other | upstream | 55254 | 12570464 ~ 12570536 (-) | True | trnav-cac_22 |
| trnav-cac_23 | other | upstream | 56383 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 58389 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 59530 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
| trnav-aac_25 | other | upstream | 61522 | 12576732 ~ 12576804 (-) | True | trnav-aac_25 |
