Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU480163 |
| length | 279 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G404719 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12686190 ~ 12686468 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403574.2 | lncRNA | downstream | 8544 | 12663011 ~ 12677646 (-) | True | LOC113535190 |
| TU480136 | lncRNA | downstream | 50977 | 12601632 ~ 12635213 (-) | True | G404692 |
| TU480131 | lncRNA | downstream | 94657 | 12589272 ~ 12591533 (-) | True | G404687 |
| TU480125 | lncRNA | downstream | 107384 | 12576532 ~ 12578806 (-) | True | G404682 |
| TU480124 | lncRNA | downstream | 108906 | 12575080 ~ 12577284 (-) | True | G404681 |
| TU480264 | lncRNA | upstream | 131116 | 12817584 ~ 12877390 (-) | True | G404799 |
| TU480265 | lncRNA | upstream | 188343 | 12874811 ~ 12942105 (-) | False | G404799 |
| TU480293 | lncRNA | upstream | 227473 | 12913941 ~ 12923945 (-) | True | G404818 |
| TU480384 | lncRNA | upstream | 297245 | 12983713 ~ 12984373 (-) | True | G404896 |
| TU480388 | lncRNA | upstream | 305733 | 12992201 ~ 12993258 (-) | True | G404900 |
| XM_026928404.2 | mRNA | downstream | 36871 | 12636850 ~ 12649319 (-) | True | si:ch211-288g17.3 |
| XM_026928400.2 | mRNA | downstream | 132430 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_034301472.1 | mRNA | upstream | 1294 | 12687762 ~ 12724515 (-) | True | kmt2ba |
| XM_026928396.2 | mRNA | upstream | 75244 | 12761712 ~ 12770589 (-) | True | ndufv1 |
| XM_026928395.2 | mRNA | upstream | 75323 | 12761791 ~ 12770681 (-) | False | ndufv1 |
| XM_026928544.2 | mRNA | upstream | 85453 | 12771921 ~ 12783866 (-) | True | hcn3 |
| XM_034301685.1 | mRNA | upstream | 104328 | 12790796 ~ 12793315 (-) | True | si:ch211-81a5.8 |
| trnav-cac_26 | other | downstream | 106539 | 12579580 ~ 12579651 (-) | True | trnav-cac_26 |
| trnav-aac_26 | other | downstream | 107389 | 12578729 ~ 12578801 (-) | True | trnav-aac_26 |
| trnav-cac_25 | other | downstream | 108530 | 12577588 ~ 12577660 (-) | True | trnav-cac_25 |
| trnav-aac_25 | other | downstream | 109386 | 12576732 ~ 12576804 (-) | True | trnav-aac_25 |
| trnav-aac_24 | other | downstream | 111375 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
| TU480489 | other | upstream | 454226 | 13140694 ~ 13141115 (-) | True | G404999 |
| TU480639 | other | upstream | 703496 | 13389964 ~ 13392735 (-) | False | dpm3 |
| TU480779 | other | upstream | 869688 | 13556156 ~ 13558620 (-) | False | cks1b |
| TU480964 | other | upstream | 1073293 | 13759761 ~ 13761516 (-) | False | s100a11 |
| TU480965 | other | upstream | 1073293 | 13759761 ~ 13761555 (-) | True | s100a11 |
