Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU481309 |
| length | 1074 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G405701 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 14313739 ~ 14314834 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577551.1 | lncRNA | downstream | 121984 | 14183486 ~ 14191755 (-) | True | LOC117596429 |
| TU481157 | lncRNA | downstream | 236589 | 14076442 ~ 14077150 (-) | True | G405575 |
| TU480986 | lncRNA | downstream | 441311 | 13815898 ~ 13872428 (-) | False | G405420 |
| TU481315 | lncRNA | upstream | 64058 | 14378892 ~ 14385650 (-) | True | G405707 |
| TU481349 | lncRNA | upstream | 160646 | 14475480 ~ 14478639 (-) | False | tpbga |
| TU481546 | lncRNA | upstream | 303815 | 14618649 ~ 14686310 (-) | True | G405900 |
| TU481548 | lncRNA | upstream | 304504 | 14619338 ~ 14654751 (-) | True | G405901 |
| TU481553 | lncRNA | upstream | 330019 | 14644853 ~ 14966111 (-) | True | G405906 |
| XM_026928095.2 | mRNA | downstream | 95569 | 14195955 ~ 14218170 (-) | False | tbc1d5 |
| XM_026928093.2 | mRNA | downstream | 95569 | 14195955 ~ 14218170 (-) | True | tbc1d5 |
| XM_026928097.2 | mRNA | downstream | 95569 | 14196853 ~ 14218170 (-) | False | tbc1d5 |
| XM_026928094.2 | mRNA | downstream | 101434 | 14196794 ~ 14212305 (-) | False | tbc1d5 |
| XM_026928099.2 | mRNA | downstream | 118273 | 14172834 ~ 14195466 (-) | True | dazl |
| XM_034301478.1 | mRNA | upstream | 6031 | 14320865 ~ 14388466 (-) | True | arid1ab |
| XM_026928374.2 | mRNA | upstream | 125966 | 14440800 ~ 14452371 (-) | True | nudc |
| XM_026928455.2 | mRNA | upstream | 145558 | 14460392 ~ 14470818 (-) | False | kdf1b |
| XM_026928456.2 | mRNA | upstream | 145558 | 14460392 ~ 14470712 (-) | False | kdf1b |
| XM_026928453.2 | mRNA | upstream | 145558 | 14460392 ~ 14470712 (-) | False | kdf1b |
| TU481171 | other | downstream | 194081 | 14114619 ~ 14119658 (-) | True | G405588 |
| XR_004577571.1 | other | downstream | 229893 | 14081372 ~ 14083846 (-) | True | npy |
| TU480965 | other | downstream | 552184 | 13759761 ~ 13761555 (-) | True | s100a11 |
| TU480964 | other | downstream | 552223 | 13759761 ~ 13761516 (-) | False | s100a11 |
| TU480779 | other | downstream | 755119 | 13556156 ~ 13558620 (-) | False | cks1b |
| trnat-ugu_14 | other | upstream | 228383 | 14543217 ~ 14543289 (-) | True | trnat-ugu_14 |
| trnat-ugu_15 | other | upstream | 231272 | 14546106 ~ 14546178 (-) | True | trnat-ugu_15 |
| TU481617 | other | upstream | 652642 | 14967476 ~ 15013988 (-) | True | G405961 |
