Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU481572 |
| length | 1127 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G405924 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 14805181 ~ 14806859 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU481579 | lncRNA | downstream | 51889 | 14749754 ~ 14753292 (-) | True | G405930 |
| TU481577 | lncRNA | downstream | 56734 | 14746848 ~ 14748447 (-) | True | G405929 |
| TU481557 | lncRNA | downstream | 84275 | 14688023 ~ 14720906 (-) | True | G405909 |
| TU481565 | lncRNA | downstream | 100869 | 14700268 ~ 14704312 (-) | True | G405917 |
| TU481546 | lncRNA | downstream | 118871 | 14618649 ~ 14686310 (-) | True | G405900 |
| TU481627 | lncRNA | upstream | 211827 | 15018686 ~ 15019240 (-) | True | G405967 |
| TU481636 | lncRNA | upstream | 241862 | 15048721 ~ 15049178 (-) | True | G405976 |
| TU481641 | lncRNA | upstream | 244830 | 15051689 ~ 15051897 (-) | True | G405981 |
| TU481642 | lncRNA | upstream | 245096 | 15051955 ~ 15052188 (-) | True | G405982 |
| TU481643 | lncRNA | upstream | 245728 | 15052587 ~ 15052844 (-) | True | G405983 |
| XM_026928369.2 | mRNA | downstream | 135141 | 14652344 ~ 14670040 (-) | True | daxx |
| XM_034301734.1 | mRNA | downstream | 167848 | 14622681 ~ 14637333 (-) | True | ctdp1 |
| XM_026928370.2 | mRNA | downstream | 190420 | 14598495 ~ 14614761 (-) | True | zbtb22b |
| XM_034301474.1 | mRNA | downstream | 218939 | 14552044 ~ 14586242 (-) | True | epb41a |
| XM_026927893.2 | mRNA | downstream | 313918 | 14481937 ~ 14491263 (-) | True | tmem222b |
| XM_026928308.2 | mRNA | upstream | 53395 | 14860254 ~ 14867598 (-) | True | gnb3b |
| XM_026928434.2 | mRNA | upstream | 90751 | 14897610 ~ 14917917 (-) | True | si:ch211-264f5.6 |
| XM_026928222.2 | mRNA | upstream | 124284 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928225.2 | mRNA | upstream | 124284 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928228.2 | mRNA | upstream | 124284 | 14931143 ~ 14964811 (-) | False | cica |
| trnat-ugu_15 | other | downstream | 259003 | 14546106 ~ 14546178 (-) | True | trnat-ugu_15 |
| trnat-ugu_14 | other | downstream | 261892 | 14543217 ~ 14543289 (-) | True | trnat-ugu_14 |
| TU481171 | other | downstream | 685523 | 14114619 ~ 14119658 (-) | True | G405588 |
| XR_004577571.1 | other | downstream | 721335 | 14081372 ~ 14083846 (-) | True | npy |
| TU480965 | other | downstream | 1043626 | 13759761 ~ 13761555 (-) | True | s100a11 |
| TU481617 | other | upstream | 160617 | 14967476 ~ 15013988 (-) | True | G405961 |
