Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU481627 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G405967 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 15018686 ~ 15019240 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU481553 | lncRNA | downstream | 52575 | 14644853 ~ 14966111 (-) | True | G405906 |
| TU481572 | lncRNA | downstream | 211827 | 14805181 ~ 14806859 (-) | True | G405924 |
| TU481579 | lncRNA | downstream | 265394 | 14749754 ~ 14753292 (-) | True | G405930 |
| TU481577 | lncRNA | downstream | 270239 | 14746848 ~ 14748447 (-) | True | G405929 |
| TU481557 | lncRNA | downstream | 297780 | 14688023 ~ 14720906 (-) | True | G405909 |
| TU481636 | lncRNA | upstream | 29481 | 15048721 ~ 15049178 (-) | True | G405976 |
| TU481641 | lncRNA | upstream | 32449 | 15051689 ~ 15051897 (-) | True | G405981 |
| TU481642 | lncRNA | upstream | 32715 | 15051955 ~ 15052188 (-) | True | G405982 |
| TU481643 | lncRNA | upstream | 33347 | 15052587 ~ 15052844 (-) | True | G405983 |
| TU481714 | lncRNA | upstream | 187961 | 15207201 ~ 15207531 (-) | True | G406054 |
| XM_026928222.2 | mRNA | downstream | 53875 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928225.2 | mRNA | downstream | 53875 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928228.2 | mRNA | downstream | 53875 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928226.2 | mRNA | downstream | 53875 | 14931143 ~ 14964811 (-) | False | cica |
| XM_026928223.2 | mRNA | downstream | 53875 | 14931143 ~ 14964811 (-) | False | cica |
| XM_034301470.1 | mRNA | upstream | 54429 | 15073669 ~ 15136790 (-) | False | LOC113534955 |
| XM_034301471.1 | mRNA | upstream | 54429 | 15073669 ~ 15136752 (-) | False | LOC113534955 |
| XM_034301469.1 | mRNA | upstream | 54429 | 15073669 ~ 15136752 (-) | True | LOC113534955 |
| XM_026927874.2 | mRNA | upstream | 145948 | 15165188 ~ 15206951 (-) | True | atp1a3a |
| TU481617 | other | downstream | 4698 | 14967476 ~ 15013988 (-) | True | G405961 |
| trnat-ugu_15 | other | downstream | 472508 | 14546106 ~ 14546178 (-) | True | trnat-ugu_15 |
| trnat-ugu_14 | other | downstream | 475397 | 14543217 ~ 14543289 (-) | True | trnat-ugu_14 |
| TU481171 | other | downstream | 899028 | 14114619 ~ 14119658 (-) | True | G405588 |
| XR_004577571.1 | other | downstream | 934840 | 14081372 ~ 14083846 (-) | True | npy |
