Item | Value |
---|---|
RNA id | XM_026927645.2 |
length | 4417 |
RNA type | mRNA |
GC content | 0.41 |
exon number | 16 |
gene id | LOC113534693 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047623.1 |
NCBI id | CM018569.1 |
chromosome length | 15305753 |
location | 4120397 ~ 4132922 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | description |
---|---|
K24504 | SP140; nuclear body protein Sp140 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU474609 | lncRNA | downstream | 14070 | 4100097 ~ 4106327 (-) | True | G399990 |
TU474566 | lncRNA | downstream | 54117 | 4009067 ~ 4066280 (-) | True | G399950 |
TU474561 | lncRNA | downstream | 82466 | 3924966 ~ 4037931 (-) | True | G399945 |
TU474524 | lncRNA | downstream | 202282 | 3916468 ~ 3918115 (-) | True | G399913 |
TU474550 | lncRNA | downstream | 209050 | 3910640 ~ 3911347 (-) | True | G399935 |
TU474649 | lncRNA | upstream | 20116 | 4153038 ~ 4154893 (-) | False | LOC113534684 |
TU474749 | lncRNA | upstream | 57819 | 4190741 ~ 4276482 (-) | True | G400085 |
TU474784 | lncRNA | upstream | 101481 | 4234403 ~ 4293157 (-) | False | G400112 |
TU474819 | lncRNA | upstream | 147855 | 4280777 ~ 4281433 (-) | True | G400131 |
TU474821 | lncRNA | upstream | 151127 | 4284049 ~ 4284393 (-) | True | G400133 |
XM_034301488.1 | mRNA | downstream | 2481 | 4106876 ~ 4117916 (-) | False | LOC113534511 |
XM_034301487.1 | mRNA | downstream | 2481 | 4106876 ~ 4117916 (-) | False | LOC113534511 |
XM_026927374.2 | mRNA | downstream | 2482 | 4106876 ~ 4117915 (-) | True | LOC113534511 |
XM_026927377.2 | mRNA | downstream | 5330 | 4106876 ~ 4115067 (-) | False | LOC113534511 |
XM_026927375.2 | mRNA | downstream | 5551 | 4106876 ~ 4114846 (-) | False | LOC113534511 |
XM_034301699.1 | mRNA | upstream | 1416 | 4134338 ~ 4144544 (-) | True | LOC113534634 |
XM_034301460.1 | mRNA | upstream | 17977 | 4150899 ~ 4159750 (-) | True | LOC113534684 |
XM_034301411.1 | mRNA | upstream | 33402 | 4166324 ~ 4168560 (-) | True | LOC117596393 |
XM_034301461.1 | mRNA | upstream | 37548 | 4170470 ~ 4175154 (-) | True | LOC117596407 |
XM_026927485.2 | mRNA | upstream | 46189 | 4179111 ~ 4187724 (-) | True | LOC113534587 |
XR_003403536.1 | other | downstream | 758571 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
XR_003403535.2 | other | downstream | 759443 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
trnae-cuc_42 | other | downstream | 808965 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
TU473965 | other | downstream | 844442 | 3264713 ~ 3275955 (-) | False | G399489 |
XR_004577542.1 | other | upstream | 828180 | 4961102 ~ 5008461 (-) | False | sept7a |
TU475643 | other | upstream | 1454476 | 5587398 ~ 5589747 (-) | True | G400815 |
TU476079 | other | upstream | 2040066 | 6172988 ~ 6175260 (-) | True | G401205 |
TU476305 | other | upstream | 2238728 | 6371650 ~ 6374490 (-) | False | polr1h |
XR_003404453.2 | other | upstream | 2303065 | 6435987 ~ 6436048 (-) | True | LOC113543912 |