Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942101.2 |
| length | 1070 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | csnk2b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 6075576 ~ 6082184 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0045859 | regulation of protein kinase activity | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0031519 | PcG protein complex | cellular_component |
| GO:0005956 | protein kinase CK2 complex | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0019887 | protein kinase regulator activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476060 | lncRNA | downstream | 53811 | 6021554 ~ 6021765 (-) | True | G401196 |
| TU475958 | lncRNA | downstream | 104402 | 5907147 ~ 5971174 (-) | True | G401106 |
| TU475747 | lncRNA | downstream | 263564 | 5811344 ~ 5812012 (-) | True | G400913 |
| TU475654 | lncRNA | downstream | 488195 | 5583555 ~ 5587381 (-) | True | G400826 |
| TU475475 | lncRNA | downstream | 694639 | 5371072 ~ 5380937 (-) | True | G400676 |
| TU476110 | lncRNA | upstream | 14795 | 6096979 ~ 6187263 (-) | True | G401230 |
| TU476142 | lncRNA | upstream | 105789 | 6187973 ~ 6188409 (-) | True | G401243 |
| TU476159 | lncRNA | upstream | 165272 | 6247456 ~ 6250036 (-) | True | G401259 |
| TU476302 | lncRNA | upstream | 277570 | 6359754 ~ 6359977 (-) | True | G401388 |
| TU476320 | lncRNA | upstream | 323122 | 6405306 ~ 6405878 (-) | True | G401403 |
| XM_026942333.2 | mRNA | downstream | 229298 | 5813904 ~ 5846278 (-) | True | dtnbp1b |
| XM_026942332.2 | mRNA | downstream | 240539 | 5813904 ~ 5835037 (-) | False | dtnbp1b |
| XM_026942331.2 | mRNA | downstream | 240539 | 5813904 ~ 5835037 (-) | False | dtnbp1b |
| XM_026942335.2 | mRNA | downstream | 252731 | 5813904 ~ 5822845 (-) | False | dtnbp1b |
| XM_026942423.2 | mRNA | downstream | 477213 | 5559980 ~ 5598363 (-) | True | pard6gb |
| XM_026942085.2 | mRNA | upstream | 2725 | 6084909 ~ 6105333 (-) | False | prrc2a |
| XM_026942088.2 | mRNA | upstream | 2725 | 6084909 ~ 6105333 (-) | False | prrc2a |
| XM_026942087.2 | mRNA | upstream | 2725 | 6084909 ~ 6105333 (-) | False | prrc2a |
| XM_026942086.2 | mRNA | upstream | 2725 | 6084909 ~ 6105333 (-) | False | prrc2a |
| XM_026942084.2 | mRNA | upstream | 2725 | 6084909 ~ 6105333 (-) | True | prrc2a |
| TU475643 | other | downstream | 485829 | 5587398 ~ 5589747 (-) | True | G400815 |
| XR_004577542.1 | other | downstream | 1067115 | 4961102 ~ 5008461 (-) | False | sept7a |
| XR_003403516.2 | other | downstream | 1942654 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 2713750 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 2714622 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| TU476079 | other | upstream | 90804 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 289466 | 6371650 ~ 6374490 (-) | False | polr1h |
| XR_003404453.2 | other | upstream | 353803 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
| TU476702 | other | upstream | 1179156 | 7261340 ~ 7276644 (-) | False | fndc5b |
| TU477767 | other | upstream | 3066327 | 9148511 ~ 9161470 (-) | False | G402673 |
