Item | Value |
---|---|
RNA id | TCONS_00008144 |
length | 1753 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 15 |
gene id | XLOC_004263 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007122.7 |
NCBI id | CM002895.2 |
chromosome length | 45484837 |
location | 36215698 ~ 36230163 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006364 | rRNA processing | biological_process |
GO:0032040 | small-subunit processome | cellular_component |
GO:0034511 | U3 snoRNA binding | molecular_function |
GO:0030515 | snoRNA binding | molecular_function |
id | description |
---|---|
ko03009 | Ribosome biogenesis |
id | description |
---|---|
ZDB-GENE-060427-1 | Predicted to enable snoRNA binding activity. Predicted to act upstream of or within rRNA processing. Predicted to be part of small-subunit processome. Orthologous to human RRP9 (ribosomal RNA processing 9, U3 small nucleolar RNA binding protein). |
ensembl_id | ENSDART00000189782 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00008124 | lncRNA | downstream | 474254 | 35725245 ~ 35741444 (-) | False | XLOC_004257 |
TCONS_00008123 | lncRNA | downstream | 474254 | 35725245 ~ 35741444 (-) | True | XLOC_004257 |
TCONS_00008837 | lncRNA | downstream | 474257 | 35664551 ~ 35741441 (-) | False | XLOC_004257 |
TCONS_00008484 | lncRNA | downstream | 474258 | 35664551 ~ 35741440 (-) | False | XLOC_004257 |
TCONS_00008839 | lncRNA | upstream | 11896 | 36242059 ~ 36246756 (-) | True | XLOC_004264 |
TCONS_00008152 | lncRNA | upstream | 60645 | 36290808 ~ 36291682 (-) | True | XLOC_004266 |
TCONS_00008841 | lncRNA | upstream | 254229 | 36484392 ~ 36687156 (-) | False | XLOC_004269 |
TCONS_00008840 | lncRNA | upstream | 254229 | 36484392 ~ 36687156 (-) | False | XLOC_004269 |
TCONS_00008161 | lncRNA | upstream | 254229 | 36484392 ~ 36687161 (-) | False | XLOC_004269 |
TCONS_00008143 | mRNA | downstream | 58727 | 36048886 ~ 36156971 (-) | True | XLOC_004262 |
TCONS_00008140 | mRNA | downstream | 58763 | 36042269 ~ 36156935 (-) | False | XLOC_004262 |
TCONS_00008142 | mRNA | downstream | 164694 | 36048579 ~ 36051004 (-) | False | XLOC_004262 |
TCONS_00008139 | mRNA | downstream | 168957 | 36041617 ~ 36046741 (-) | False | XLOC_004262 |
TCONS_00008141 | mRNA | downstream | 169240 | 36042445 ~ 36046458 (-) | False | XLOC_004262 |
TCONS_00008146 | mRNA | upstream | 24121 | 36254284 ~ 36279664 (-) | False | XLOC_004265 |
TCONS_00008147 | mRNA | upstream | 24901 | 36255064 ~ 36263886 (-) | False | XLOC_004265 |
TCONS_00008148 | mRNA | upstream | 28375 | 36258538 ~ 36279620 (-) | False | XLOC_004265 |
TCONS_00008149 | mRNA | upstream | 33449 | 36263612 ~ 36279602 (-) | True | XLOC_004265 |
TCONS_00008150 | mRNA | upstream | 50360 | 36280523 ~ 36341189 (-) | False | XLOC_004266 |
TCONS_00008119 | other | downstream | 990559 | 35225022 ~ 35225139 (-) | True | XLOC_004254 |
TCONS_00008105 | other | downstream | 1749185 | 34466395 ~ 34466513 (-) | True | XLOC_004247 |
TCONS_00008102 | other | downstream | 1860036 | 34355544 ~ 34355662 (-) | True | XLOC_004245 |
TCONS_00008088 | other | downstream | 2249426 | 33966158 ~ 33966272 (-) | True | XLOC_004234 |
TCONS_00008078 | other | downstream | 2844331 | 33371251 ~ 33371367 (-) | True | XLOC_004227 |
TCONS_00008174 | other | upstream | 1069208 | 37299371 ~ 37299485 (-) | True | XLOC_004279 |
TCONS_00008194 | other | upstream | 1944908 | 38175071 ~ 38175150 (-) | True | XLOC_004294 |
TCONS_00008207 | other | upstream | 2717824 | 38947987 ~ 38949751 (-) | True | XLOC_004305 |
TCONS_00008210 | other | upstream | 2859712 | 39089875 ~ 39089991 (-) | True | XLOC_004308 |
TCONS_00008222 | other | upstream | 3952518 | 40182681 ~ 40182796 (-) | True | XLOC_004319 |