Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301461.1 |
| length | 759 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC117596407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 4170470 ~ 4175154 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474649 | lncRNA | downstream | 15577 | 4153038 ~ 4154893 (-) | False | LOC113534684 |
| TU474609 | lncRNA | downstream | 64143 | 4100097 ~ 4106327 (-) | True | G399990 |
| TU474566 | lncRNA | downstream | 104190 | 4009067 ~ 4066280 (-) | True | G399950 |
| TU474561 | lncRNA | downstream | 132539 | 3924966 ~ 4037931 (-) | True | G399945 |
| TU474524 | lncRNA | downstream | 252355 | 3916468 ~ 3918115 (-) | True | G399913 |
| TU474749 | lncRNA | upstream | 15587 | 4190741 ~ 4276482 (-) | True | G400085 |
| TU474784 | lncRNA | upstream | 59249 | 4234403 ~ 4293157 (-) | False | G400112 |
| TU474819 | lncRNA | upstream | 105623 | 4280777 ~ 4281433 (-) | True | G400131 |
| TU474821 | lncRNA | upstream | 108895 | 4284049 ~ 4284393 (-) | True | G400133 |
| TU474783 | lncRNA | upstream | 115441 | 4290595 ~ 4293157 (-) | True | G400112 |
| XM_034301411.1 | mRNA | downstream | 1910 | 4166324 ~ 4168560 (-) | True | LOC117596393 |
| XM_034301460.1 | mRNA | downstream | 10720 | 4150899 ~ 4159750 (-) | True | LOC113534684 |
| XM_034301699.1 | mRNA | downstream | 25926 | 4134338 ~ 4144544 (-) | True | LOC113534634 |
| XM_026927646.2 | mRNA | downstream | 37548 | 4120397 ~ 4132922 (-) | False | LOC113534693 |
| XM_026927485.2 | mRNA | upstream | 3957 | 4179111 ~ 4187724 (-) | True | LOC113534587 |
| XM_026942401.2 | mRNA | upstream | 120692 | 4295846 ~ 4338427 (-) | False | maptb |
| XM_026942404.2 | mRNA | upstream | 120692 | 4295846 ~ 4337644 (-) | False | maptb |
| XM_026942407.2 | mRNA | upstream | 120692 | 4295846 ~ 4337632 (-) | False | maptb |
| XM_026942409.2 | mRNA | upstream | 120692 | 4295846 ~ 4337632 (-) | False | maptb |
| XR_003403516.2 | other | downstream | 37548 | 4124249 ~ 4132922 (-) | False | LOC113534693 |
| XR_003403536.1 | other | downstream | 808644 | 3361748 ~ 3361826 (-) | True | LOC113534843 |
| XR_003403535.2 | other | downstream | 809516 | 3360882 ~ 3360954 (-) | True | LOC113534841 |
| trnae-cuc_42 | other | downstream | 859038 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
| TU473969 | other | downstream | 894515 | 3273840 ~ 3275955 (-) | False | G399489 |
| XR_004577542.1 | other | upstream | 785948 | 4961102 ~ 5008461 (-) | False | sept7a |
| TU475643 | other | upstream | 1412244 | 5587398 ~ 5589747 (-) | True | G400815 |
| TU476079 | other | upstream | 1997834 | 6172988 ~ 6175260 (-) | True | G401205 |
| TU476305 | other | upstream | 2196496 | 6371650 ~ 6374490 (-) | False | polr1h |
| XR_003404453.2 | other | upstream | 2260833 | 6435987 ~ 6436048 (-) | True | LOC113543912 |
