Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301639.1 |
| length | 826 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | LOC117595704 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 3178517 ~ 3188087 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474026 | lncRNA | downstream | 9914 | 3167877 ~ 3168603 (-) | True | G399532 |
| TU473993 | lncRNA | downstream | 22505 | 3147299 ~ 3156012 (-) | False | LOC113525117 |
| TU473994 | lncRNA | downstream | 23501 | 3147299 ~ 3155016 (-) | False | LOC113525117 |
| TU473997 | lncRNA | downstream | 23501 | 3154675 ~ 3155016 (-) | False | LOC113525117 |
| TU473983 | lncRNA | downstream | 108249 | 3011867 ~ 3070268 (-) | True | G399494 |
| TU474024 | lncRNA | upstream | 47556 | 3235643 ~ 3249326 (-) | True | G399530 |
| TU474035 | lncRNA | upstream | 55470 | 3243557 ~ 3245044 (-) | True | G399541 |
| TU474037 | lncRNA | upstream | 85469 | 3273556 ~ 3274842 (-) | True | G399543 |
| TU473948 | lncRNA | upstream | 97968 | 3286055 ~ 3291628 (-) | False | G399489 |
| TU473957 | lncRNA | upstream | 98495 | 3286582 ~ 3295273 (-) | False | G399489 |
| XM_034301635.1 | mRNA | downstream | 40942 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301634.1 | mRNA | downstream | 40942 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301631.1 | mRNA | downstream | 40942 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301632.1 | mRNA | downstream | 40944 | 3118335 ~ 3137573 (-) | True | LOC113525116 |
| XM_034301457.1 | mRNA | downstream | 66265 | 3079234 ~ 3112252 (-) | True | si:ch211-108d22.2 |
| XM_026911562.2 | mRNA | upstream | 18821 | 3206908 ~ 3222780 (-) | True | jpt1b |
| XM_026911585.2 | mRNA | upstream | 35978 | 3224065 ~ 3234324 (-) | True | LOC113525126 |
| XM_034301458.1 | mRNA | upstream | 61999 | 3250086 ~ 3293868 (-) | True | LOC113534415 |
| XM_034301771.1 | mRNA | upstream | 107832 | 3295919 ~ 3309397 (-) | False | gga3b |
| XM_034301770.1 | mRNA | upstream | 107832 | 3295919 ~ 3309397 (-) | True | gga3b |
| trnay-gua_7 | other | downstream | 9096 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473971 | other | downstream | 214360 | 2961713 ~ 2964157 (-) | True | G399490 |
| TU473396 | other | downstream | 751911 | 2372296 ~ 2426606 (-) | True | G399028 |
| trnad-guc_31 | other | downstream | 930286 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473235 | other | downstream | 1297459 | 1825341 ~ 1881058 (-) | False | G398890 |
| TU473964 | other | upstream | 15203 | 3203290 ~ 3275955 (-) | False | G399489 |
| TU474032 | other | upstream | 36013 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
| TU473965 | other | upstream | 76626 | 3264713 ~ 3275955 (-) | False | G399489 |
| TU473969 | other | upstream | 85753 | 3273840 ~ 3275955 (-) | False | G399489 |
| trnae-cuc_42 | other | upstream | 123274 | 3311361 ~ 3311432 (-) | True | trnae-cuc_42 |
