Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301693.1 |
| length | 798 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | tmem220 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 2008006 ~ 2011992 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU473294 | lncRNA | downstream | 9325 | 1998086 ~ 1998681 (-) | True | G398942 |
| TU473276 | lncRNA | downstream | 48444 | 1956046 ~ 1959562 (-) | True | G398925 |
| TU473273 | lncRNA | downstream | 55822 | 1951921 ~ 1952184 (-) | True | G398922 |
| XR_004577585.1 | lncRNA | downstream | 131586 | 1875199 ~ 1876420 (-) | True | LOC117596467 |
| TU473234 | lncRNA | downstream | 143163 | 1832816 ~ 1864843 (-) | False | G398890 |
| TU473287 | lncRNA | upstream | 19176 | 2031168 ~ 2032632 (-) | True | G398935 |
| TU473308 | lncRNA | upstream | 28309 | 2040301 ~ 2040923 (-) | True | G398953 |
| TU473380 | lncRNA | upstream | 250612 | 2262604 ~ 2268036 (-) | False | G399016 |
| TU473379 | lncRNA | upstream | 254314 | 2266306 ~ 2268036 (-) | False | G399016 |
| TU473376 | lncRNA | upstream | 254698 | 2266690 ~ 2347812 (-) | True | G399016 |
| XM_026910199.2 | mRNA | downstream | 729 | 2003622 ~ 2007277 (-) | True | mrps7 |
| XM_034301787.1 | mRNA | downstream | 25450 | 1979258 ~ 1982556 (-) | True | jmjd8 |
| XM_034301727.1 | mRNA | downstream | 37574 | 1962730 ~ 1970432 (-) | False | LOC117596454 |
| XM_034301671.1 | mRNA | upstream | 342917 | 2354909 ~ 2365507 (-) | True | mmd |
| XM_026910059.2 | mRNA | upstream | 385424 | 2397416 ~ 2402161 (-) | True | tmem100a |
| XM_026910081.2 | mRNA | upstream | 486987 | 2498979 ~ 2507141 (-) | False | cbx2 |
| XM_026910080.2 | mRNA | upstream | 486987 | 2498979 ~ 2507140 (-) | True | cbx2 |
| XM_026910082.2 | mRNA | upstream | 486987 | 2498979 ~ 2506756 (-) | False | cbx2 |
| TU473235 | other | downstream | 126948 | 1825341 ~ 1881058 (-) | False | G398890 |
| TU473233 | other | downstream | 143163 | 1730090 ~ 1864843 (-) | True | G398890 |
| TU472900 | other | downstream | 416277 | 1569003 ~ 1591729 (-) | False | st13 |
| XR_004577580.1 | other | downstream | 545936 | 1461324 ~ 1462070 (-) | False | LOC117596459 |
| trnad-guc_31 | other | upstream | 236168 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473396 | other | upstream | 360304 | 2372296 ~ 2426606 (-) | True | G399028 |
| TU473971 | other | upstream | 949721 | 2961713 ~ 2964157 (-) | True | G399490 |
| trnay-gua_7 | other | upstream | 1157342 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473964 | other | upstream | 1191298 | 3203290 ~ 3275955 (-) | False | G399489 |
