Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577593.1 |
| length | 73 |
| RNA type | ncRNA |
| GC content | 0.45 |
| exon number | 1 |
| gene id | LOC117596479 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 10503289 ~ 10503361 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU478510 | lncRNA | downstream | 312100 | 10189171 ~ 10191189 (-) | True | G403324 |
| TU478508 | lncRNA | downstream | 319721 | 10182837 ~ 10183568 (-) | True | G403323 |
| TU478499 | lncRNA | downstream | 408659 | 10090569 ~ 10094630 (-) | True | G403316 |
| TU478437 | lncRNA | downstream | 550965 | 9934989 ~ 9952324 (-) | True | G403262 |
| TU478299 | lncRNA | downstream | 606165 | 9896896 ~ 9897124 (-) | True | G403164 |
| XR_004577535.1 | lncRNA | upstream | 504259 | 11007620 ~ 11021628 (-) | True | LOC117596414 |
| XR_004577592.1 | lncRNA | upstream | 617208 | 11120569 ~ 11131188 (-) | True | LOC117596478 |
| TU478955 | lncRNA | upstream | 635421 | 11138782 ~ 11139126 (-) | True | G403715 |
| TU478957 | lncRNA | upstream | 647446 | 11150807 ~ 11151179 (-) | True | G403717 |
| TU479108 | lncRNA | upstream | 708525 | 11211886 ~ 11213838 (-) | False | G403823 |
| XM_026942218.2 | mRNA | downstream | 87571 | 10412385 ~ 10415718 (-) | True | cited4a |
| XM_026942162.2 | mRNA | downstream | 288408 | 10203813 ~ 10214881 (-) | True | si:ch211-30b16.2 |
| XM_034301768.1 | mRNA | downstream | 320523 | 10121543 ~ 10182766 (-) | True | LOC113543865 |
| XM_026942286.2 | mRNA | downstream | 389356 | 10096124 ~ 10113933 (-) | False | ube2e1 |
| XM_026942287.2 | mRNA | downstream | 389773 | 10096124 ~ 10113516 (-) | True | ube2e1 |
| XM_026942428.2 | mRNA | upstream | 488351 | 10991712 ~ 10996996 (-) | True | stmn1a |
| XM_026942217.2 | mRNA | upstream | 740144 | 11243505 ~ 11274312 (-) | True | LOC113543771 |
| XM_034301644.1 | mRNA | upstream | 880832 | 11384193 ~ 11397339 (-) | True | LOC113543744 |
| XM_034301801.1 | mRNA | upstream | 915792 | 11419153 ~ 11430318 (-) | True | LOC113543901 |
| XM_026942191.2 | mRNA | upstream | 945094 | 11448455 ~ 11498259 (-) | True | LOC113543760 |
| TU477891 | other | downstream | 1087082 | 9387002 ~ 9416207 (-) | False | triqk |
| XR_003404456.1 | other | downstream | 1126250 | 9376926 ~ 9377039 (-) | True | LOC113543915 |
| XR_004577570.1 | other | downstream | 1251495 | 9227395 ~ 9251794 (-) | False | runx1t1 |
| TU477767 | other | downstream | 1341819 | 9148511 ~ 9161470 (-) | False | G402673 |
| TU476702 | other | downstream | 3226645 | 7261340 ~ 7276644 (-) | False | fndc5b |
| XR_003404458.1 | other | upstream | 432 | 10503793 ~ 10503874 (-) | True | LOC113543917 |
| XR_003404460.2 | other | upstream | 827 | 10504188 ~ 10504325 (-) | True | LOC113543919 |
| XR_003404459.1 | other | upstream | 1687 | 10505048 ~ 10505185 (-) | True | LOC113543918 |
| trnaa-ugc_19 | other | upstream | 937303 | 11440664 ~ 11440735 (-) | True | trnaa-ugc_19 |
| trnap-ugg_24 | other | upstream | 938154 | 11441515 ~ 11441586 (-) | True | trnap-ugg_24 |
