Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577594.1 |
| length | 155 |
| RNA type | ncRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC117596481 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 907625 ~ 907779 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472497 | lncRNA | downstream | 25733 | 879025 ~ 881892 (-) | True | G398371 |
| TU472522 | lncRNA | downstream | 56286 | 850450 ~ 851339 (-) | True | G398395 |
| TU472521 | lncRNA | downstream | 58872 | 847745 ~ 848753 (-) | True | G398394 |
| TU472520 | lncRNA | downstream | 60835 | 841936 ~ 846790 (-) | True | G398393 |
| TU472461 | lncRNA | downstream | 263616 | 642402 ~ 644009 (-) | True | G398338 |
| TU472548 | lncRNA | upstream | 34478 | 942257 ~ 944486 (-) | True | G398413 |
| TU472490 | lncRNA | upstream | 41913 | 949692 ~ 996770 (-) | True | G398364 |
| TU472569 | lncRNA | upstream | 107164 | 1014943 ~ 1083831 (-) | False | G398433 |
| TU472575 | lncRNA | upstream | 117641 | 1025420 ~ 1102347 (-) | True | G398437 |
| TU472570 | lncRNA | upstream | 118563 | 1026342 ~ 1083831 (-) | False | G398433 |
| XM_034301676.1 | mRNA | downstream | 1250 | 891920 ~ 906375 (-) | True | fam234b |
| XM_034301679.1 | mRNA | downstream | 17323 | 887935 ~ 890302 (-) | False | LOC117596444 |
| XM_034301595.1 | mRNA | downstream | 68184 | 833892 ~ 839441 (-) | False | LOC113527139 |
| XM_026910201.2 | mRNA | upstream | 43423 | 951202 ~ 954200 (-) | True | fmc1 |
| XM_034301448.1 | mRNA | upstream | 200914 | 1108693 ~ 1111909 (-) | True | LOC117596399 |
| XM_026910221.2 | mRNA | upstream | 207855 | 1115634 ~ 1124106 (-) | False | LOC113524091 |
| XM_026910220.2 | mRNA | upstream | 207855 | 1115634 ~ 1124105 (-) | True | LOC113524091 |
| XM_034301450.1 | mRNA | upstream | 265621 | 1173400 ~ 1176207 (-) | True | LOC117596401 |
| TU472487 | other | downstream | 1264 | 899528 ~ 906361 (-) | False | fam234b |
| TU472485 | other | downstream | 17345 | 740243 ~ 890280 (-) | False | LOC117596444 |
| TU472486 | other | downstream | 17345 | 885702 ~ 890280 (-) | True | LOC117596444 |
| TU472265 | other | downstream | 425617 | 474566 ~ 482008 (-) | False | LOC117596396 |
| TU472228 | other | downstream | 582080 | 319734 ~ 325545 (-) | False | pick1 |
| XR_004577595.1 | other | upstream | 2290 | 910069 ~ 910223 (-) | True | LOC117596482 |
| XR_003403678.1 | other | upstream | 6419 | 914198 ~ 914352 (-) | True | LOC113536357 |
| TU472541 | other | upstream | 11485 | 919264 ~ 920503 (-) | True | G398408 |
| TU472483 | other | upstream | 43427 | 951206 ~ 953961 (-) | False | fmc1 |
| TU472656 | other | upstream | 368874 | 1276653 ~ 1281771 (-) | False | LOC117596427 |
