Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnaa-ugc_19 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.54 |
| exon number | 1 |
| gene id | trnaa-ugc_19 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 11440664 ~ 11440735 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479143 | lncRNA | downstream | 44624 | 11395737 ~ 11396040 (-) | True | G403851 |
| XR_004577563.1 | lncRNA | downstream | 77708 | 11327698 ~ 11362956 (-) | True | LOC117596437 |
| XR_004577564.1 | lncRNA | downstream | 180273 | 11256791 ~ 11260391 (-) | True | LOC117596438 |
| TU479108 | lncRNA | downstream | 226826 | 11211886 ~ 11213838 (-) | False | G403823 |
| TU479111 | lncRNA | downstream | 226826 | 11211886 ~ 11213838 (-) | True | G403823 |
| TU479193 | lncRNA | upstream | 90558 | 11531293 ~ 11533016 (-) | True | G403893 |
| TU479300 | lncRNA | upstream | 228028 | 11668763 ~ 11696191 (-) | False | G403981 |
| TU479299 | lncRNA | upstream | 230932 | 11671667 ~ 11688373 (-) | True | G403981 |
| TU479303 | lncRNA | upstream | 238520 | 11679255 ~ 11680996 (-) | True | G403982 |
| TU479297 | lncRNA | upstream | 250969 | 11691704 ~ 11696191 (-) | False | G403981 |
| XM_034301801.1 | mRNA | downstream | 10346 | 11419153 ~ 11430318 (-) | True | LOC113543901 |
| XM_034301644.1 | mRNA | downstream | 43325 | 11384193 ~ 11397339 (-) | True | LOC113543744 |
| XM_026942217.2 | mRNA | downstream | 166352 | 11243505 ~ 11274312 (-) | True | LOC113543771 |
| XM_026942428.2 | mRNA | downstream | 443668 | 10991712 ~ 10996996 (-) | True | stmn1a |
| XM_026942218.2 | mRNA | downstream | 1024946 | 10412385 ~ 10415718 (-) | True | cited4a |
| XM_026942191.2 | mRNA | upstream | 7720 | 11448455 ~ 11498259 (-) | True | LOC113543760 |
| XM_026942193.2 | mRNA | upstream | 11185 | 11451920 ~ 11498259 (-) | False | LOC113543760 |
| XM_026942192.2 | mRNA | upstream | 11185 | 11451920 ~ 11498148 (-) | False | LOC113543760 |
| XM_026942197.2 | mRNA | upstream | 11185 | 11451920 ~ 11481325 (-) | False | LOC113543760 |
| XM_026942195.2 | mRNA | upstream | 11185 | 11451920 ~ 11465478 (-) | False | LOC113543760 |
| XR_003404459.1 | other | downstream | 935479 | 10505048 ~ 10505185 (-) | True | LOC113543918 |
| XR_003404460.2 | other | downstream | 936339 | 10504188 ~ 10504325 (-) | True | LOC113543919 |
| XR_003404458.1 | other | downstream | 936790 | 10503793 ~ 10503874 (-) | True | LOC113543917 |
| XR_004577593.1 | other | downstream | 937303 | 10503289 ~ 10503361 (-) | True | LOC117596479 |
| TU477891 | other | downstream | 2024457 | 9387002 ~ 9416207 (-) | False | triqk |
| trnap-ugg_24 | other | upstream | 780 | 11441515 ~ 11441586 (-) | True | trnap-ugg_24 |
| TU479536 | other | upstream | 336634 | 11777369 ~ 11779203 (-) | False | si:ch73-347e22.4 |
| trnay-gua_12 | other | upstream | 369648 | 11810383 ~ 11810470 (-) | True | trnay-gua_12 |
| trnay-gua_13 | other | upstream | 371142 | 11811877 ~ 11811964 (-) | True | trnay-gua_13 |
| trnay-gua_14 | other | upstream | 372633 | 11813368 ~ 11813455 (-) | True | trnay-gua_14 |
