Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnav-cac_22 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | trnav-cac_22 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 12570464 ~ 12570536 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU480079 | lncRNA | downstream | 16739 | 12536347 ~ 12553725 (-) | False | fam131ba |
| TU480108 | lncRNA | downstream | 55254 | 12514471 ~ 12515210 (-) | True | G404667 |
| TU479803 | lncRNA | downstream | 294962 | 12275268 ~ 12275502 (-) | True | G404421 |
| TU479760 | lncRNA | downstream | 422801 | 12146083 ~ 12147663 (-) | False | grin2da |
| TU479664 | lncRNA | downstream | 444624 | 12125457 ~ 12125840 (-) | True | G404282 |
| TU480124 | lncRNA | upstream | 4544 | 12575080 ~ 12577284 (-) | True | G404681 |
| TU480125 | lncRNA | upstream | 5996 | 12576532 ~ 12578806 (-) | True | G404682 |
| TU480131 | lncRNA | upstream | 18736 | 12589272 ~ 12591533 (-) | True | G404687 |
| TU480136 | lncRNA | upstream | 31096 | 12601632 ~ 12635213 (-) | True | G404692 |
| XR_003403574.2 | lncRNA | upstream | 92475 | 12663011 ~ 12677646 (-) | True | LOC113535190 |
| XM_026928401.2 | mRNA | downstream | 16704 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928400.2 | mRNA | downstream | 16704 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928399.2 | mRNA | downstream | 16704 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928398.2 | mRNA | downstream | 16704 | 12515316 ~ 12553760 (-) | False | fam131ba |
| XM_026928397.2 | mRNA | downstream | 16704 | 12515316 ~ 12553760 (-) | True | fam131ba |
| XM_026928404.2 | mRNA | upstream | 66314 | 12636850 ~ 12649319 (-) | True | si:ch211-288g17.3 |
| XM_034301472.1 | mRNA | upstream | 117226 | 12687762 ~ 12724515 (-) | True | kmt2ba |
| XM_026928396.2 | mRNA | upstream | 191176 | 12761712 ~ 12770589 (-) | True | ndufv1 |
| XM_026928395.2 | mRNA | upstream | 191255 | 12761791 ~ 12770681 (-) | False | ndufv1 |
| XM_026928544.2 | mRNA | upstream | 201385 | 12771921 ~ 12783866 (-) | True | hcn3 |
| TU480085 | other | downstream | 86566 | 12430995 ~ 12483898 (-) | True | G404644 |
| trnay-gua_21 | other | downstream | 746501 | 11823876 ~ 11823963 (-) | True | trnay-gua_21 |
| trnay-gua_20 | other | downstream | 748000 | 11822377 ~ 11822464 (-) | True | trnay-gua_20 |
| trnay-gua_19 | other | downstream | 749500 | 11820877 ~ 11820964 (-) | True | trnay-gua_19 |
| trnay-gua_18 | other | downstream | 750993 | 11819384 ~ 11819471 (-) | True | trnay-gua_18 |
| trnav-cac_23 | other | upstream | 1057 | 12571593 ~ 12571666 (-) | True | trnav-cac_23 |
| trnav-cac_24 | other | upstream | 3063 | 12573599 ~ 12573671 (-) | True | trnav-cac_24 |
| trnav-aac_24 | other | upstream | 4204 | 12574740 ~ 12574815 (-) | True | trnav-aac_24 |
| trnav-aac_25 | other | upstream | 6196 | 12576732 ~ 12576804 (-) | True | trnav-aac_25 |
| trnav-cac_25 | other | upstream | 7052 | 12577588 ~ 12577660 (-) | True | trnav-cac_25 |
