Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008183 |
| length | 1365 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | XLOC_004285 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 37683278 ~ 37693019 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070112-2272 | Orthologous to human C1orf116 (chromosome 1 open reading frame 116). |
| ensembl_id | ENSDART00000185340 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008488 | lncRNA | downstream | 71055 | 37613547 ~ 37614538 (-) | True | XLOC_004284 |
| TCONS_00008181 | lncRNA | downstream | 81612 | 37601004 ~ 37603981 (-) | True | XLOC_004283 |
| TCONS_00008487 | lncRNA | downstream | 81629 | 37593008 ~ 37603964 (-) | False | XLOC_004283 |
| TCONS_00008850 | lncRNA | upstream | 89129 | 37780578 ~ 37827473 (-) | False | XLOC_004287 |
| TCONS_00008851 | lncRNA | upstream | 112331 | 37803780 ~ 37827473 (-) | True | XLOC_004287 |
| TCONS_00008852 | lncRNA | upstream | 293502 | 37984951 ~ 37987558 (-) | True | XLOC_004290 |
| TCONS_00008192 | lncRNA | upstream | 348515 | 38039964 ~ 38041422 (-) | True | XLOC_004292 |
| TCONS_00008853 | lncRNA | upstream | 393423 | 38084872 ~ 38087013 (-) | True | XLOC_004293 |
| TCONS_00008180 | mRNA | downstream | 96300 | 37509102 ~ 37589293 (-) | True | XLOC_004281 |
| TCONS_00008179 | mRNA | downstream | 136882 | 37439687 ~ 37548711 (-) | False | XLOC_004281 |
| TCONS_00008178 | mRNA | downstream | 176592 | 37431693 ~ 37509001 (-) | False | XLOC_004281 |
| TCONS_00008177 | mRNA | downstream | 260186 | 37313508 ~ 37425407 (-) | True | XLOC_004280 |
| TCONS_00008176 | mRNA | downstream | 274101 | 37310881 ~ 37411492 (-) | False | XLOC_004280 |
| TCONS_00008185 | mRNA | upstream | 16935 | 37708384 ~ 37717709 (-) | False | XLOC_004286 |
| TCONS_00008186 | mRNA | upstream | 17392 | 37708841 ~ 37720024 (-) | False | XLOC_004286 |
| TCONS_00008187 | mRNA | upstream | 26107 | 37717556 ~ 37720266 (-) | True | XLOC_004286 |
| TCONS_00008188 | mRNA | upstream | 157256 | 37848705 ~ 37880492 (-) | True | XLOC_004288 |
| TCONS_00008189 | mRNA | upstream | 257390 | 37948839 ~ 37997419 (-) | False | XLOC_004289 |
| TCONS_00008174 | other | downstream | 386108 | 37299371 ~ 37299485 (-) | True | XLOC_004279 |
| TCONS_00008119 | other | downstream | 2460454 | 35225022 ~ 35225139 (-) | True | XLOC_004254 |
| TCONS_00008105 | other | downstream | 3219080 | 34466395 ~ 34466513 (-) | True | XLOC_004247 |
| TCONS_00008102 | other | downstream | 3329931 | 34355544 ~ 34355662 (-) | True | XLOC_004245 |
| TCONS_00008088 | other | downstream | 3719321 | 33966158 ~ 33966272 (-) | True | XLOC_004234 |
| TCONS_00008194 | other | upstream | 483622 | 38175071 ~ 38175150 (-) | True | XLOC_004294 |
| TCONS_00008207 | other | upstream | 1256538 | 38947987 ~ 38949751 (-) | True | XLOC_004305 |
| TCONS_00008210 | other | upstream | 1398426 | 39089875 ~ 39089991 (-) | True | XLOC_004308 |
| TCONS_00008222 | other | upstream | 2491232 | 40182681 ~ 40182796 (-) | True | XLOC_004319 |
| TCONS_00008236 | other | upstream | 2986764 | 40678213 ~ 40696136 (-) | True | XLOC_004327 |
