RNA id: TCONS_00008205


Basic Information

Item Value
RNA id TCONS_00008205
length 909
RNA type mRNA
GC content 0.45
exon number 5
gene id XLOC_004303
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 38922744 ~ 38924944 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAATTGGCGCTAAGCTGGGCAAAGGAGGCTTTGGAACCGTTTACACTGGGACCCGTATAAAAGATCGCCTTCCGGTGGCATTAAAAGTGGCTGACTTCAAGGTTAAGCAATTCATCCAAGTTGATGATTTTCTCCAGCCACTTCCAGCGGAGATCGCTCTGCACTTTCTTGCCTCTAAAGGCCCCAAAGCTAAACCAATTGTTAAGCTTCTGGACTGGAAAGTGGAGGCTAATCGTTACTTACTAGTCCTAGAGCGGCCCGTACCCTGTGAGAACTTATGGGAATTTCTATGTAAATACGACGGTAGAATCCCAGAGAAGATATTATGGAAAATCATGTTCCATACAACAATTGCAGCTGACATCTGCTGCAAACGTGGAGTGCTTCACCGCGATATCAAGGCTGAGAATTTGCTGATTAACCTGCGGACCCATCAAGTCAAACTGACTGACTTTGGGTGTGGTGAACGCCTTACTAGGAGCTGTTACAAAGAGTACTGCGGCACACCACAGTACTGCCCTCCCGAGTTCAATAGCACTGGCTTATACTACGGGGAGCCAGCGACAGTGTGGTCACTCGGGATTCTTCAATATTTGCTGATGTTCAAAAAATTTCCAGACTACCATGACCTCCAAAACTTGACTTTCACAAATTTAGGGCAATATGGATGGTCAAAAGAATGCTGTGATTTTATTAGCTGTTGTTTGCAGACTGACTACCAACTTCGGTCTAAGCTGCAAACACTCCGTACCCATGACTGGTTTAAGGCGGAGAACAAGCCGCAATGAGGAGAGATGTCCTTTTTTAATAGGTGGATCTAGCCAGTCCATCCATGCCACCATAGTCCTTTAGCTAAACATATCTTCATCCATTACAACCTTATAGAGAGAAAGCTGAACATAATTTGGT

Function

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-263 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDART00000133077

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008196 lncRNA downstream 448391 38471808 ~ 38474353 (-) False XLOC_004296
TCONS_00008860 lncRNA downstream 496941 38339439 ~ 38425803 (-) True XLOC_004295
TCONS_00008859 lncRNA downstream 723857 38149889 ~ 38198887 (-) False XLOC_004294
TCONS_00008858 lncRNA downstream 731636 38149889 ~ 38191108 (-) False XLOC_004294
TCONS_00008857 lncRNA downstream 731715 38149889 ~ 38191029 (-) False XLOC_004294
TCONS_00008489 lncRNA upstream 283240 39208184 ~ 39212765 (-) True XLOC_004311
TCONS_00008861 lncRNA upstream 378653 39303597 ~ 39305163 (-) True XLOC_004312
TCONS_00008214 lncRNA upstream 712796 39637740 ~ 39645310 (-) True XLOC_004313
TCONS_00008862 lncRNA upstream 1535907 40460851 ~ 40462487 (-) True XLOC_004323
TCONS_00008230 lncRNA upstream 1712410 40637354 ~ 40647206 (-) False XLOC_004326
TCONS_00008204 mRNA downstream 8479 38912133 ~ 38914265 (-) True XLOC_004302
TCONS_00008203 mRNA downstream 12217 38908406 ~ 38910527 (-) True XLOC_004301
TCONS_00008202 mRNA downstream 22928 38893819 ~ 38899816 (-) True XLOC_004300
TCONS_00008201 mRNA downstream 368350 38540138 ~ 38554394 (-) True XLOC_004299
TCONS_00008200 mRNA downstream 389239 38517255 ~ 38533505 (-) True XLOC_004298
TCONS_00008206 mRNA upstream 1780 38926724 ~ 38928760 (-) True XLOC_004304
TCONS_00008208 mRNA upstream 88819 39013763 ~ 39044595 (-) True XLOC_004306
TCONS_00008209 mRNA upstream 150669 39075613 ~ 39105253 (-) True XLOC_004307
TCONS_00008211 mRNA upstream 187397 39112341 ~ 39118882 (-) False XLOC_004309
TCONS_00008212 mRNA upstream 187404 39112348 ~ 39118929 (-) True XLOC_004309
TCONS_00008194 other downstream 747594 38175071 ~ 38175150 (-) True XLOC_004294
TCONS_00008174 other downstream 1623259 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008119 other downstream 3697605 35225022 ~ 35225139 (-) True XLOC_004254
TCONS_00008105 other downstream 4456231 34466395 ~ 34466513 (-) True XLOC_004247
TCONS_00008102 other downstream 4567082 34355544 ~ 34355662 (-) True XLOC_004245
TCONS_00008207 other upstream 23043 38947987 ~ 38949751 (-) True XLOC_004305
TCONS_00008210 other upstream 164931 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008222 other upstream 1257737 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008236 other upstream 1753269 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008244 other upstream 2153247 41078191 ~ 41084363 (-) True XLOC_004334

Expression Profile

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