RNA id: TCONS_00008219


Basic Information

Item Value
RNA id TCONS_00008219
length 694
RNA type mRNA
GC content 0.48
exon number 6
gene id XLOC_004317
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40134856 ~ 40172295 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AATGCAGATCTGTTTGTCCAGGTCTTTTATTTGTTCGTCTCGCCGGTTTGTCTCTCTCAGTTCTTGTTTGGTGGTGTTGAGGATCTTCTGGATGCTCTGCAGCTCCTCAATCATACTCTTCTGCTCGTCTGCATCTTTCTGAAGCTGGATCTCCTGAGACTGAGGGAAAAGCATGGAAACCTCAGGATCCTCCAGAATGGCGTTTCTGTTGATGTCTGTGACGGTTCTGCATCTGATCACTCTAGCCATGCTCTTCATCGCCACCATGGAGAAGTCATGGTGGACTTTGGGAGACATCCAGAACACAGATCTGTGGTATAAATGTTCGTATGATAACTCTTCAGGAACCTGGTTATGTGCGTCTGTCAATGAGAGCGAATGGCTGCAGTCGGTGCAGGCGCTGATGATCTTGTCTGTGATCCTGTCCTCCATCTCCTTCATGGTGTTTCTGGGTCAGCTCTTCACCATGTCTAAAGGAGGACTCTTCTACTTCACAGGCCTCTGTCAGCTTTTTGCAGGTTTTGCAGCATTTGCGGCTGTCCTCATCTACACCTTTCAGAAGAGGGAGATTCTTCAAAATGACACTGAACTGGAAAAGGGCCGTTTCGGCTACTGTTATATCCTGGCCTGGGTGTGTGTGCCACTTTTACTAGTCAGTGGTGCACTTTATGTGCATCTGCGCAAACGGGCCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000186510

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008214 lncRNA downstream 489687 39637740 ~ 39645310 (-) True XLOC_004313
TCONS_00008861 lncRNA downstream 829834 39303597 ~ 39305163 (-) True XLOC_004312
TCONS_00008489 lncRNA downstream 922232 39208184 ~ 39212765 (-) True XLOC_004311
TCONS_00008196 lncRNA downstream 1660644 38471808 ~ 38474353 (-) False XLOC_004296
TCONS_00008860 lncRNA downstream 1709194 38339439 ~ 38425803 (-) True XLOC_004295
TCONS_00008862 lncRNA upstream 295168 40460851 ~ 40462487 (-) True XLOC_004323
TCONS_00008230 lncRNA upstream 471671 40637354 ~ 40647206 (-) False XLOC_004326
TCONS_00008235 lncRNA upstream 512524 40678207 ~ 40678766 (-) False XLOC_004327
TCONS_00008240 lncRNA upstream 595035 40760718 ~ 40761318 (-) True XLOC_004330
TCONS_00008241 lncRNA upstream 692971 40858654 ~ 40860470 (-) True XLOC_004331
TCONS_00008217 mRNA downstream 6275 40103720 ~ 40128722 (-) True XLOC_004316
TCONS_00008216 mRNA downstream 33751 40088141 ~ 40101246 (-) True XLOC_004315
TCONS_00008215 mRNA downstream 104858 40024182 ~ 40030139 (-) True XLOC_004314
TCONS_00008213 mRNA downstream 932082 39167846 ~ 39202915 (-) True XLOC_004310
TCONS_00008212 mRNA downstream 1016068 39112348 ~ 39118929 (-) True XLOC_004309
TCONS_00008221 mRNA upstream 9478 40175161 ~ 40204621 (-) True XLOC_004318
TCONS_00008223 mRNA upstream 62070 40227753 ~ 40257225 (-) True XLOC_004320
TCONS_00008224 mRNA upstream 166108 40331791 ~ 40418975 (-) True XLOC_004321
TCONS_00008225 mRNA upstream 265946 40431629 ~ 40457325 (-) True XLOC_004322
TCONS_00008226 mRNA upstream 301935 40467618 ~ 40504170 (-) True XLOC_004324
TCONS_00008210 other downstream 1045006 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008207 other downstream 1185246 38947987 ~ 38949751 (-) True XLOC_004305
TCONS_00008194 other downstream 1959847 38175071 ~ 38175150 (-) True XLOC_004294
TCONS_00008174 other downstream 2835512 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008119 other downstream 4909858 35225022 ~ 35225139 (-) True XLOC_004254
TCONS_00008222 other upstream 16998 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008236 other upstream 512530 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008244 other upstream 912508 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008250 other upstream 1209328 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008295 other upstream 3957644 44123327 ~ 44123458 (-) True XLOC_004381

Expression Profile

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