RNA id: TCONS_00008227


Basic Information

Item Value
RNA id TCONS_00008227
length 2016
RNA type mRNA
GC content 0.43
exon number 9
gene id XLOC_004325
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40505044 ~ 40519886 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AATCACAGTGGACTGCGCATTGTTTGAGTTCAACCGTTGTATGTGTTGACGGAAGTTTACGATCTGCTAATACCTCTTATTTCACCACATTTACCGCAACATCGTTTAATAATGTTACGTTTATCCCTCAGATACGTACAAGTACCGTATGCCATTTAGTTTGACCCGCCAATAATGAATCGCGAACTTAGCTTTTAACTGGTTGCTATGGCGACGCAATGGCGGCGCTCGAGGAGCTCGACGCTTTGCGAAAGAAGAACAGAGATTTGTTGGAAAAACTTAAGAAACAAAGCGAGAAACTGCATCAAATGATCATCTCCGACTCTCAGGAGGTGGACAGAAATCTGAGCTCTGTCTGCGAAGGATTTACCTTAAATCGAGCGCCTTTAAAAGAGAAAAACGGAGAGCAGCCGCCGCGAGCTTCAGCTTCTACAGCGAGGAAAACAATCCAAATATGCGATGAACAGCTTCCTGCAGATTTTGAAAACCGCACACTGGACCTACATAAACTCACACACAGTCAAAGTTCAGAAGCGACCGCCTATGGTACACTCCTGCAGGACACGGGGAACAGTCGCTGGACAGGACAATGCCGAACTGTGAGACTAATGCTGCCCAAATCTGCAGATCTTACAGCAGACAGTGACATATTGAGAGAAGCTGACAGAGCCTCGACTGCTGGACTACAGATGGAGACTACATCAGATAGACGCATGCAGCCTTTACTGGGCTATGACTGGATAGCAGGCCTTCTGGATGCTGAGAGCTCTCTGGCTGATCGTTCTGAGCAGTTTTTCAGTGATCTCCGCAGCTTCCGTCAGGTTAACAGAGACGAGTGCATCCACAGCTTATTATCAGGACTTCCATCTGTTGCTGACCTTGCGTCTTCAACTCTTGATAGTGAAGAGGTGCGTCCGCCTGCAGATTCGCATCAGTGCACTTTCTGCTACAGAGTAAACAGTCGATTGTTTGCGGTTCCGCTGGATGCACAGGCCGCCTGTCCAGTGTGCAAGAAGCCCAAATCTGAACACCCTCATACTGAAACAGAGCCTGCTTTAATCAGAGTCAGTATACCTCGCTCGACCCTGCTGCCAGCGCACAAATACAAAGCCCATCGCCGCAGCAGTTTTGATCCGTCTGACAGCCTGGGTTTACCTTCTCACTGTTTGTCCGGCTGGTCCAATCCTATGCTGACCTCGGGCTCTCAGATGATCAGTCTGGACCTGCGGAGCTCCATGACAAAACCTGCAGCCACAGGAGATTCAACATCATCCTGTTTTCACAATAAACCGGATTCTTACTTGCCCAGTGGAACAAAAGGCCAGCTTTCGGACCAGTATCAAAATGTGTCTCGTTTACCCCGGTATAACTTTCAGCATTCAGAACCAAAGACATCTGAACCGCACAGCCTCACTAATGCTCTTTGCTGATGTTATTGCAGAAGTTATGTTTCATATGGAGCAACACATGATTATTTTGGTTTACTGAAATGAGTTATTGTGTTATGAATGATTGTTGTTTTGTATCTATGACAATAAACAGGCATTAATCAGTGTGTGTATGAATCATACGCATGCTGACTTCTGAGACGTTGGGgatggattgttttgtttttacgtgAAATCTAATTCTATAATTATTTTCCTAGAAATAAATTAGGAGGAACATAAATTGtgatgattagttttttttaaatttcttttaataTGCATTAAGCAATTAAACATCACGTGTAGCTTACAATCTCACTGCATACAAATGAGTTCAAATCAGTCATGTCCacatttaaatgcatattattttGTTGCATTATTCACTTCACATCCACTATATGCATGTGCTCATGTATCTATGCACATTATGAAGTGCTTTAGCATTTTCTTACTAAAATGTAAAAGGGGATCACTTGATGTACCTAAAGTTCCTACACttcatgtttaaaacaaaaacacttttgatCCTTGATgttcttgtcttttttattaaaaGATATCTCAAATAAACCATAAATCACCA

Function

GO:

id name namespace
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle biological_process
GO:0030336 negative regulation of cell migration biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-130620-1 Predicted to act upstream of or within negative regulation of G2/M transition of mitotic cell cycle and negative regulation of cell migration. Orthologous to human MIIP (migration and invasion inhibitory protein).

Ensembl:

ensembl_id ENSDART00000172819

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008862 lncRNA downstream 42557 40460851 ~ 40462487 (-) True XLOC_004323
TCONS_00008214 lncRNA downstream 859734 39637740 ~ 39645310 (-) True XLOC_004313
TCONS_00008861 lncRNA downstream 1199881 39303597 ~ 39305163 (-) True XLOC_004312
TCONS_00008489 lncRNA downstream 1292279 39208184 ~ 39212765 (-) True XLOC_004311
TCONS_00008196 lncRNA downstream 2030691 38471808 ~ 38474353 (-) False XLOC_004296
TCONS_00008230 lncRNA upstream 117468 40637354 ~ 40647206 (-) False XLOC_004326
TCONS_00008235 lncRNA upstream 158321 40678207 ~ 40678766 (-) False XLOC_004327
TCONS_00008240 lncRNA upstream 240832 40760718 ~ 40761318 (-) True XLOC_004330
TCONS_00008241 lncRNA upstream 338768 40858654 ~ 40860470 (-) True XLOC_004331
TCONS_00008242 lncRNA upstream 373880 40893766 ~ 40895245 (-) True XLOC_004332
TCONS_00008226 mRNA downstream 874 40467618 ~ 40504170 (-) True XLOC_004324
TCONS_00008225 mRNA downstream 47719 40431629 ~ 40457325 (-) True XLOC_004322
TCONS_00008224 mRNA downstream 86069 40331791 ~ 40418975 (-) True XLOC_004321
TCONS_00008223 mRNA downstream 247819 40227753 ~ 40257225 (-) True XLOC_004320
TCONS_00008221 mRNA downstream 300423 40175161 ~ 40204621 (-) True XLOC_004318
TCONS_00008228 mRNA upstream 102424 40622310 ~ 40647237 (-) False XLOC_004326
TCONS_00008229 mRNA upstream 102942 40622828 ~ 40647194 (-) False XLOC_004326
TCONS_00008231 mRNA upstream 117668 40637554 ~ 40647190 (-) True XLOC_004326
TCONS_00008232 mRNA upstream 157730 40677616 ~ 40681054 (-) False XLOC_004327
TCONS_00008233 mRNA upstream 158092 40677978 ~ 40681011 (-) False XLOC_004327
TCONS_00008222 other downstream 322248 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008210 other downstream 1415053 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008207 other downstream 1555293 38947987 ~ 38949751 (-) True XLOC_004305
TCONS_00008194 other downstream 2329894 38175071 ~ 38175150 (-) True XLOC_004294
TCONS_00008174 other downstream 3205559 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008236 other upstream 158327 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008244 other upstream 558305 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008250 other upstream 855125 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008295 other upstream 3603441 44123327 ~ 44123458 (-) True XLOC_004381
TCONS_00008303 other upstream 3817271 44337157 ~ 44339220 (-) True XLOC_004385

Expression Profile

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