Item | Value |
---|---|
RNA id | TCONS_00008264 |
length | 2425 |
RNA type | mRNA |
GC content | 0.53 |
exon number | 21 |
gene id | XLOC_004357 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007122.7 |
NCBI id | CM002895.2 |
chromosome length | 45484837 |
location | 42304585 ~ 42418374 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006936 | muscle contraction | biological_process |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
id | description |
---|---|
ZDB-GENE-061013-184 | Predicted to be involved in protein localization to plasma membrane; regulation of membrane depolarization during cardiac muscle cell action potential; and regulation of voltage-gated sodium channel activity. Predicted to act upstream of or within muscle contraction. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLMAP (sarcolemma associated protein). |
ensembl_id | ENSDART00000104444 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00008494 | lncRNA | downstream | 158401 | 42151444 ~ 42152573 (-) | True | XLOC_004356 |
TCONS_00008492 | lncRNA | downstream | 185692 | 42113072 ~ 42125282 (-) | True | XLOC_004352 |
TCONS_00008868 | lncRNA | downstream | 186703 | 42122748 ~ 42124271 (-) | True | XLOC_004353 |
TCONS_00008493 | lncRNA | downstream | 186722 | 42121855 ~ 42124252 (-) | False | XLOC_004353 |
TCONS_00008867 | lncRNA | downstream | 266693 | 42042562 ~ 42044281 (-) | True | XLOC_004349 |
TCONS_00008495 | lncRNA | upstream | 318070 | 42735264 ~ 42735848 (-) | True | XLOC_004362 |
TCONS_00008496 | lncRNA | upstream | 325340 | 42742534 ~ 42745180 (-) | True | XLOC_004363 |
TCONS_00008497 | lncRNA | upstream | 335707 | 42752901 ~ 42754000 (-) | False | XLOC_004364 |
TCONS_00008869 | lncRNA | upstream | 392320 | 42809514 ~ 42817704 (-) | True | XLOC_004365 |
TCONS_00008870 | lncRNA | upstream | 644688 | 43061882 ~ 43062986 (-) | True | XLOC_004368 |
TCONS_00008259 | mRNA | downstream | 80483 | 42150896 ~ 42230491 (-) | True | XLOC_004355 |
TCONS_00008258 | mRNA | downstream | 176006 | 42128552 ~ 42134968 (-) | True | XLOC_004354 |
TCONS_00008257 | mRNA | downstream | 204664 | 42101661 ~ 42106310 (-) | True | XLOC_004351 |
TCONS_00008256 | mRNA | downstream | 211329 | 42062067 ~ 42099645 (-) | True | XLOC_004350 |
TCONS_00008255 | mRNA | downstream | 314017 | 41994287 ~ 41996957 (-) | True | XLOC_004346 |
TCONS_00008269 | mRNA | upstream | 49640 | 42466834 ~ 42472941 (-) | True | XLOC_004358 |
TCONS_00008270 | mRNA | upstream | 88858 | 42506052 ~ 42525450 (-) | True | XLOC_004359 |
TCONS_00008271 | mRNA | upstream | 115270 | 42532464 ~ 42554290 (-) | True | XLOC_004360 |
TCONS_00008272 | mRNA | upstream | 303009 | 42720203 ~ 42730063 (-) | True | XLOC_004361 |
TCONS_00008273 | mRNA | upstream | 314696 | 42731890 ~ 42739148 (-) | False | XLOC_004362 |
TCONS_00008250 | other | downstream | 935848 | 41375011 ~ 41375126 (-) | True | XLOC_004339 |
TCONS_00008244 | other | downstream | 1226611 | 41078191 ~ 41084363 (-) | True | XLOC_004334 |
TCONS_00008236 | other | downstream | 1614838 | 40678213 ~ 40696136 (-) | True | XLOC_004327 |
TCONS_00008222 | other | downstream | 2128178 | 40182681 ~ 40182796 (-) | True | XLOC_004319 |
TCONS_00008210 | other | downstream | 3220983 | 39089875 ~ 39089991 (-) | True | XLOC_004308 |
TCONS_00008295 | other | upstream | 1706133 | 44123327 ~ 44123458 (-) | True | XLOC_004381 |
TCONS_00008303 | other | upstream | 1919963 | 44337157 ~ 44339220 (-) | True | XLOC_004385 |
TCONS_00008317 | other | upstream | 2189657 | 44606851 ~ 44613734 (-) | False | XLOC_004396 |
TCONS_00008372 | other | upstream | 3014339 | 45431533 ~ 45435014 (-) | False | XLOC_004416 |