Item | Value |
---|---|
RNA id | TCONS_00008873 |
length | 4349 |
lncRNA type | inter_gene |
GC content | 0.32 |
exon number | 2 |
gene id | XLOC_004374 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007122.7 |
NCBI id | CM002895.2 |
chromosome length | 45484837 |
location | 43461395 ~ 43466520 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0030182 | neuron differentiation | biological_process |
GO:0048666 | neuron development | biological_process |
GO:0098742 | cell-cell adhesion via plasma-membrane adhesion molecules | biological_process |
GO:0048699 | generation of neurons | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00008872 | lncRNA | downstream | 4137 | 43455469 ~ 43457258 (-) | True | XLOC_004373 |
TCONS_00008287 | lncRNA | downstream | 231031 | 43228412 ~ 43230364 (-) | True | XLOC_004372 |
TCONS_00008871 | lncRNA | downstream | 257188 | 43201535 ~ 43204207 (-) | True | XLOC_004371 |
TCONS_00008870 | lncRNA | downstream | 398409 | 43061882 ~ 43062986 (-) | True | XLOC_004368 |
TCONS_00008869 | lncRNA | downstream | 643691 | 42809514 ~ 42817704 (-) | True | XLOC_004365 |
TCONS_00008874 | lncRNA | upstream | 247190 | 43713710 ~ 43716304 (-) | True | XLOC_004376 |
TCONS_00008292 | lncRNA | upstream | 633819 | 44100339 ~ 44108669 (-) | False | XLOC_004380 |
TCONS_00008293 | lncRNA | upstream | 633819 | 44100339 ~ 44116448 (-) | False | XLOC_004380 |
TCONS_00008294 | lncRNA | upstream | 633819 | 44100339 ~ 44120354 (-) | True | XLOC_004380 |
TCONS_00008875 | lncRNA | upstream | 918294 | 44384814 ~ 44385749 (-) | True | XLOC_004387 |
TCONS_00008286 | mRNA | downstream | 235140 | 43146352 ~ 43226255 (-) | True | XLOC_004370 |
TCONS_00008284 | mRNA | downstream | 260401 | 43135198 ~ 43200994 (-) | False | XLOC_004370 |
TCONS_00008285 | mRNA | downstream | 323683 | 43135199 ~ 43137712 (-) | False | XLOC_004370 |
TCONS_00008283 | mRNA | downstream | 356920 | 43102421 ~ 43104475 (-) | True | XLOC_004369 |
TCONS_00008281 | mRNA | downstream | 459133 | 42933823 ~ 43002262 (-) | True | XLOC_004367 |
TCONS_00008288 | mRNA | upstream | 3656 | 43470176 ~ 43473824 (-) | True | XLOC_004375 |
TCONS_00008289 | mRNA | upstream | 481571 | 43948091 ~ 43948885 (-) | True | XLOC_004377 |
TCONS_00008290 | mRNA | upstream | 553324 | 44019844 ~ 44030962 (-) | True | XLOC_004378 |
TCONS_00008291 | mRNA | upstream | 564209 | 44030729 ~ 44037692 (-) | True | XLOC_004379 |
TCONS_00008296 | mRNA | upstream | 678092 | 44144612 ~ 44163164 (-) | True | XLOC_004382 |
TCONS_00008250 | other | downstream | 2086269 | 41375011 ~ 41375126 (-) | True | XLOC_004339 |
TCONS_00008244 | other | downstream | 2377032 | 41078191 ~ 41084363 (-) | True | XLOC_004334 |
TCONS_00008236 | other | downstream | 2765259 | 40678213 ~ 40696136 (-) | True | XLOC_004327 |
TCONS_00008222 | other | downstream | 3278599 | 40182681 ~ 40182796 (-) | True | XLOC_004319 |
TCONS_00008210 | other | downstream | 4371404 | 39089875 ~ 39089991 (-) | True | XLOC_004308 |
TCONS_00008295 | other | upstream | 656807 | 44123327 ~ 44123458 (-) | True | XLOC_004381 |
TCONS_00008303 | other | upstream | 870637 | 44337157 ~ 44339220 (-) | True | XLOC_004385 |
TCONS_00008317 | other | upstream | 1140331 | 44606851 ~ 44613734 (-) | False | XLOC_004396 |
TCONS_00008372 | other | upstream | 1965013 | 45431533 ~ 45435014 (-) | False | XLOC_004416 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | TU495627 | True | 1823 | lncRNA | 0.38 | 1 | CI01000306 | 1082547 ~ 1084369 (-) |