RNA id: TCONS_00008896



Basic Information


Item Value
RNA id TCONS_00008896
length 572
RNA type mRNA
GC content 0.37
exon number 2
gene id XLOC_004430
representative True

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 638435 ~ 639945 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GATTTTAAGCGGCGGTAAACAGTATTATGGCAGAGTCGTCAATATTTACTCGCTATTTGCGAGTAAATTATGGTCAACGATGTGCAAATGATTGTCCGGATGTGCTCTACAACACCGCAGAGCAAAGCTTGAGAAAGGTTTTAAGTTTTATGCATCTTCCTACCTGTGCAATTATGAAGGTAACATTATGAGATTCAGAGCTAGAAAATTTTATGTGTTACTTCATCCTGGAGCGGACATCCGTCAGAAGATCCATGCCATCGTCTGCTAGTTAATAGCTCCTGCTCTTGTGTGGCTGAGAGtgggatatgcaaacatttggttgCTTTGCTTTTGCAGACAGCCCAATactctgaaatgtgtaatgtgtgttgtcACATGAACAATTGTTTGGAATGGATCAATTATGTGTTAAGTTCAATGAAACAGatgggtgatttatttatttatttaatacgtaTAAGCCCAAATACCTCTCTATGCACAAGTTACAGAAAAAGCACCTGATTCAAAAAAACAACTGATTCAATGTCATTTTTTCCgttcatctgaataaaatatttttttcaaaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000152508

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00010714 lncRNA upstream 95425 542709 ~ 543010 (+) True XLOC_004429
TCONS_00010859 lncRNA upstream 179140 410327 ~ 459295 (+) True XLOC_004426
TCONS_00008890 lncRNA upstream 181920 410038 ~ 456515 (+) False XLOC_004426
TCONS_00010858 lncRNA upstream 349874 287433 ~ 288561 (+) True XLOC_004422
TCONS_00010857 lncRNA upstream 357170 280141 ~ 281265 (+) True XLOC_004421
TCONS_00008899 lncRNA downstream 141054 780999 ~ 782872 (+) True XLOC_004431
TCONS_00010860 lncRNA downstream 252233 892178 ~ 895643 (+) False XLOC_004433
TCONS_00010861 lncRNA downstream 252235 892180 ~ 895643 (+) True XLOC_004433
TCONS_00010862 lncRNA downstream 262643 902588 ~ 903652 (+) True XLOC_004434
TCONS_00010863 lncRNA downstream 434458 1074403 ~ 1078180 (+) True XLOC_004436
TCONS_00008895 mRNA upstream 98224 532019 ~ 540211 (+) True XLOC_004428
TCONS_00008891 mRNA upstream 110409 465701 ~ 528026 (+) False XLOC_004427
TCONS_00008893 mRNA upstream 110409 499881 ~ 528026 (+) False XLOC_004427
TCONS_00008892 mRNA upstream 140952 466324 ~ 497483 (+) False XLOC_004427
TCONS_00008888 mRNA upstream 230359 387850 ~ 408076 (+) False XLOC_004425
TCONS_00008897 mRNA downstream 55674 695619 ~ 786808 (+) False XLOC_004431
TCONS_00008898 mRNA downstream 123106 763051 ~ 779547 (+) False XLOC_004431
TCONS_00008900 mRNA downstream 164369 804314 ~ 808443 (+) True XLOC_004432
TCONS_00008901 mRNA downstream 360378 1000323 ~ 1010416 (+) False XLOC_004435
TCONS_00008902 mRNA downstream 360581 1000526 ~ 1006626 (+) True XLOC_004435
TCONS_00008894 other upstream 116613 509947 ~ 521822 (+) True XLOC_004427
TCONS_00008960 other downstream 3857419 4497364 ~ 4497479 (+) True XLOC_004480
TCONS_00008972 other downstream 4411617 5051562 ~ 5051697 (+) True XLOC_004492
TCONS_00008973 other downstream 4412498 5052443 ~ 5052578 (+) True XLOC_004493
TCONS_00008974 other downstream 4417276 5057221 ~ 5057356 (+) True XLOC_004494
TCONS_00008975 other downstream 4421622 5061567 ~ 5061697 (+) True XLOC_004495

Expression Profile


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