Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008942 |
| length | 1202 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | XLOC_004465 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 3723650 ~ 3732014 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0033148 | positive regulation of intracellular estrogen receptor signaling pathway | biological_process |
| GO:0051568 | histone H3-K4 methylation | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:1902808 | positive regulation of cell cycle G1/S phase transition | biological_process |
| GO:0044666 | MLL3/4 complex | cellular_component |
| GO:0030331 | estrogen receptor binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-4801 | Predicted to enable estrogen receptor binding activity. Acts upstream of or within brain development. Predicted to be part of MLL3/4 complex. Is expressed in brain. Orthologous to human PAGR1 (PAXIP1 associated glutamate rich protein 1). |
| ensembl_id | ENSDART00000179922 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010870 | lncRNA | upstream | 704094 | 2995887 ~ 3019556 (+) | False | XLOC_004459 |
| TCONS_00008935 | lncRNA | upstream | 714728 | 3003970 ~ 3008922 (+) | True | XLOC_004459 |
| TCONS_00010866 | lncRNA | upstream | 951260 | 2769589 ~ 2772390 (+) | False | XLOC_004456 |
| TCONS_00010871 | lncRNA | downstream | 254065 | 3986079 ~ 3991423 (+) | False | XLOC_004469 |
| TCONS_00010872 | lncRNA | downstream | 254080 | 3986094 ~ 3991423 (+) | False | XLOC_004469 |
| TCONS_00010873 | lncRNA | downstream | 254177 | 3986191 ~ 3991423 (+) | False | XLOC_004469 |
| TCONS_00010874 | lncRNA | downstream | 254189 | 3986203 ~ 3991423 (+) | False | XLOC_004469 |
| TCONS_00010875 | lncRNA | downstream | 254194 | 3986208 ~ 3991423 (+) | True | XLOC_004469 |
| TCONS_00008941 | mRNA | upstream | 148993 | 3571770 ~ 3574657 (+) | True | XLOC_004464 |
| TCONS_00008940 | mRNA | upstream | 412973 | 3301149 ~ 3310677 (+) | True | XLOC_004463 |
| TCONS_00008939 | mRNA | upstream | 450578 | 3262564 ~ 3273072 (+) | True | XLOC_004462 |
| TCONS_00008938 | mRNA | upstream | 630626 | 3078223 ~ 3093024 (+) | True | XLOC_004461 |
| TCONS_00008937 | mRNA | upstream | 630923 | 3078221 ~ 3092727 (+) | False | XLOC_004461 |
| TCONS_00008945 | mRNA | downstream | 116095 | 3848109 ~ 3861759 (+) | False | XLOC_004466 |
| TCONS_00008946 | mRNA | downstream | 116100 | 3848114 ~ 3861234 (+) | True | XLOC_004466 |
| TCONS_00008947 | mRNA | downstream | 139438 | 3871452 ~ 3890216 (+) | False | XLOC_004467 |
| TCONS_00008948 | mRNA | downstream | 143887 | 3875901 ~ 3909738 (+) | True | XLOC_004467 |
| TCONS_00008949 | mRNA | downstream | 180530 | 3912544 ~ 3923070 (+) | True | XLOC_004468 |
| TCONS_00008894 | other | upstream | 3201828 | 509947 ~ 521822 (+) | True | XLOC_004427 |
| TCONS_00008960 | other | downstream | 765350 | 4497364 ~ 4497479 (+) | True | XLOC_004480 |
| TCONS_00008972 | other | downstream | 1319548 | 5051562 ~ 5051697 (+) | True | XLOC_004492 |
| TCONS_00008973 | other | downstream | 1320429 | 5052443 ~ 5052578 (+) | True | XLOC_004493 |
| TCONS_00008974 | other | downstream | 1325207 | 5057221 ~ 5057356 (+) | True | XLOC_004494 |
| TCONS_00008975 | other | downstream | 1329553 | 5061567 ~ 5061697 (+) | True | XLOC_004495 |
