Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008963 |
| length | 1068 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 8 |
| gene id | XLOC_004482 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 4686145 ~ 4725660 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0000123 | histone acetyltransferase complex | cellular_component |
| GO:0044545 | NSL complex | cellular_component |
| GO:0035035 | histone acetyltransferase binding | molecular_function |
| GO:0046972 | histone acetyltransferase activity (H4-K16 specific) | molecular_function |
| GO:0043995 | histone acetyltransferase activity (H4-K5 specific) | molecular_function |
| GO:0043996 | histone acetyltransferase activity (H4-K8 specific) | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-121219-5 | Predicted to enable histone acetyltransferase binding activity. Predicted to be part of NSL complex. Human ortholog(s) of this gene implicated in Koolen de Vries syndrome. Orthologous to human KANSL1 (KAT8 regulatory NSL complex subunit 1). |
| ensembl_id | ENSDART00000152134 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010877 | lncRNA | upstream | 239067 | 4428123 ~ 4473148 (+) | True | XLOC_004479 |
| TCONS_00010876 | lncRNA | upstream | 261763 | 4408659 ~ 4450452 (+) | True | XLOC_004478 |
| TCONS_00010718 | lncRNA | upstream | 605805 | 4103788 ~ 4106410 (+) | True | XLOC_004472 |
| TCONS_00010717 | lncRNA | upstream | 618642 | 4092452 ~ 4093573 (+) | True | XLOC_004471 |
| TCONS_00010875 | lncRNA | upstream | 720792 | 3986208 ~ 3991423 (+) | True | XLOC_004469 |
| TCONS_00010878 | lncRNA | downstream | 7293 | 4729017 ~ 4734988 (+) | True | XLOC_004483 |
| TCONS_00010879 | lncRNA | downstream | 26847 | 4748571 ~ 4751852 (+) | True | XLOC_004484 |
| TCONS_00010880 | lncRNA | downstream | 113125 | 4834849 ~ 4835314 (+) | True | XLOC_004485 |
| TCONS_00010719 | lncRNA | downstream | 1259540 | 5981264 ~ 5981577 (+) | True | XLOC_004507 |
| TCONS_00008994 | lncRNA | downstream | 1319854 | 6041578 ~ 6048286 (+) | False | XLOC_004509 |
| TCONS_00008961 | mRNA | upstream | 135399 | 4573696 ~ 4576816 (+) | True | XLOC_004481 |
| TCONS_00008959 | mRNA | upstream | 433886 | 4260779 ~ 4278329 (+) | True | XLOC_004477 |
| TCONS_00008957 | mRNA | upstream | 473388 | 4222854 ~ 4238827 (+) | False | XLOC_004476 |
| TCONS_00008958 | mRNA | upstream | 473388 | 4225199 ~ 4238827 (+) | True | XLOC_004476 |
| TCONS_00008956 | mRNA | upstream | 473516 | 4220353 ~ 4238699 (+) | False | XLOC_004476 |
| TCONS_00008964 | mRNA | downstream | 123724 | 4845448 ~ 4854555 (+) | True | XLOC_004486 |
| TCONS_00008965 | mRNA | downstream | 147524 | 4869248 ~ 4893492 (+) | True | XLOC_004487 |
| TCONS_00008966 | mRNA | downstream | 179257 | 4900981 ~ 4906924 (+) | True | XLOC_004488 |
| TCONS_00008967 | mRNA | downstream | 198727 | 4920451 ~ 4962882 (+) | False | XLOC_004489 |
| TCONS_00008968 | mRNA | downstream | 198727 | 4920451 ~ 4963153 (+) | True | XLOC_004489 |
| TCONS_00008960 | other | upstream | 214736 | 4497364 ~ 4497479 (+) | True | XLOC_004480 |
| TCONS_00008894 | other | upstream | 4190393 | 509947 ~ 521822 (+) | True | XLOC_004427 |
| TCONS_00008972 | other | downstream | 329838 | 5051562 ~ 5051697 (+) | True | XLOC_004492 |
| TCONS_00008973 | other | downstream | 330719 | 5052443 ~ 5052578 (+) | True | XLOC_004493 |
| TCONS_00008974 | other | downstream | 335497 | 5057221 ~ 5057356 (+) | True | XLOC_004494 |
| TCONS_00008975 | other | downstream | 339843 | 5061567 ~ 5061697 (+) | True | XLOC_004495 |
| TCONS_00008977 | other | downstream | 368091 | 5089815 ~ 5089930 (+) | True | XLOC_004497 |
