RNA id: AMCG00000031


Basic Information

Item Value
RNA id AMCG00000031
length 222
RNA type mRNA
GC content 0.45
exon number 1
gene id AMCG00000031
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 114557 ~ 114778 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGGAGCCTTAGCATGTCCTGGTACCTACAGAAGCAGTGGGGCAAACAACTGGAGTTCATAGTGGATGAGAAAAATATTCATGGTCAGGGTTTTGGAAATCGCTTTGGCATTATACACAAACCCAAGGAAAACCAGTTCATTCTCAACATCAGCAGGCTGTCGGCAAAGGACATGGCAGTCTATTACTGTGCTACAAGCCACCATGATATAGCTCCATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185241 lncRNA downstream 116558 231336 ~ 247005 (+) False AMCG00000032
TU185251 lncRNA downstream 116558 231336 ~ 247005 (+) False AMCG00000032
TU185246 lncRNA downstream 117308 232086 ~ 247005 (+) False AMCG00000032
TU185248 lncRNA downstream 117308 232086 ~ 247005 (+) False AMCG00000032
TU185252 lncRNA downstream 117308 232086 ~ 247005 (+) False AMCG00000032
AMCG00000027 mRNA upstream 7875 106015 ~ 106682 (+) True AMCG00000027
AMCG00000025 mRNA upstream 10195 55439 ~ 104362 (+) True AMCG00000025
AMCG00000026 mRNA upstream 76782 28694 ~ 37775 (+) True AMCG00000026
AMCG00000029 mRNA upstream 85893 27600 ~ 28664 (+) True AMCG00000029
AMCG00000030 mRNA downstream 26243 141021 ~ 146934 (+) True AMCG00000030
AMCG00000028 mRNA downstream 32167 146945 ~ 155807 (+) True AMCG00000028
AMCG00000032 mRNA downstream 119101 233879 ~ 246914 (+) False AMCG00000032
AMCG00000035 mRNA downstream 141679 256457 ~ 316480 (+) True AMCG00000035
AMCG00000034 mRNA downstream 202786 317564 ~ 336417 (+) True AMCG00000034
TU185255 other upstream 49268 64746 ~ 65289 (+) False AMCG00000025
TU185221 other upstream 77983 35282 ~ 36574 (+) False AMCG00000026
TU185240 other downstream 125724 240502 ~ 247005 (+) True AMCG00000032
TU185369 other downstream 334874 449652 ~ 498511 (+) True G147311
TU185496 other downstream 948307 1063085 ~ 1116950 (+) True G147416
TU185878 other downstream 2288952 2403730 ~ 2403972 (+) True G147726
TU186234 other downstream 3578331 3693109 ~ 3695802 (+) False AMCG00000094

Expression Profile