RNA id: AMCG00000033



Basic Information


Item Value
RNA id AMCG00000033
length 678
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00000033
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 255301 ~ 256970 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAAACACACCCCGGCTGCTGCAGGGAGGGAAACCCGGGGTGGAGAGCAGAACACTCCCCCCAAGAAGGCTGGCGAGAGTGGGTGAGACAGCCGAGAAATGCCATGACCAGCTAACGGCGCGATGGCGACGCGCCAATGAGAGCCTGAGAGCTTTCGCTGCTGACATCGGTTTCCTGGCGAGGGGGGGCTACCCCAATTTCCAGGAGGAAGTGGCGCTGCAAGCTTTCACCAGGGTACTGACACCCGACACTCTGCGGCACCAGGTCCTGATCACCAGACCACACACCCTAGACACAGCGCTGACTTCTGCCCGGCACATGGACATGGTGTTCGGGCTAAGCCACCAGAGCCGGTCACCCACTAGCAGTGCACCCACCTGCCGTGCAGCTGACCcagaagaggagggagagatgCCTGAAAAGAGGGCGCTCCCCCCAGATGTAGATGGCCAATCAGCAGCGGGACCGGTGTCCACCTCAATAGAAACGGCGAAGGCGGTGCAGGTGCTACTGGGACGGAGTAGTCAGGGTATCTCCCCCAGCCAGGAGGGGGAGCTCCGCACACTGCTAGCGGAATTCCCGGACCTGTTTGAAGCCAAAGACGAAGACTGCAGCCGCACCCGGCTGGTACAGCACAAGATTGACACTGGCTCCGCGGCCCCCATTCCAGTGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU185290 lncRNA downstream 29968 195473 ~ 225333 (-) True G147248
TU185214 lncRNA downstream 234911 19601 ~ 20390 (-) True G147201
TU185362 lncRNA upstream 171453 428423 ~ 432307 (-) True G147305
TU185423 lncRNA upstream 403388 660358 ~ 680183 (-) True G147358
TU185440 lncRNA upstream 482636 739606 ~ 740609 (-) True G147368
TU185502 lncRNA upstream 545841 802811 ~ 887879 (-) False G147420
TU185503 lncRNA upstream 571485 828455 ~ 887879 (-) True G147420
AMCG00000036 mRNA upstream 86441 343411 ~ 364668 (-) True AMCG00000036
AMCG00000037 mRNA upstream 131380 388350 ~ 391817 (-) False AMCG00000037
AMCG00000043 mRNA upstream 316405 573375 ~ 593613 (-) True AMCG00000043
AMCG00000042 mRNA upstream 446687 703657 ~ 709451 (-) True AMCG00000042
AMCG00000045 mRNA upstream 582807 839777 ~ 840646 (-) True AMCG00000045
TU185350 other upstream 130148 387118 ~ 392135 (-) False AMCG00000037
TU185352 other upstream 130148 387118 ~ 392482 (-) True AMCG00000037
TU185384 other upstream 227750 484720 ~ 485583 (-) True G147324
TU186746 other upstream 5081839 5338809 ~ 5342491 (-) True G148395
TU186991 other upstream 5804352 6061322 ~ 6067184 (-) False AMCG00000177

Expression Profile