Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000071 |
| length | 756 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 6 |
| gene id | AMCG00000071 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 2128584 ~ 2135898 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| id | description |
|---|---|
| K10869 | RAD51L1, RAD51B; RAD51-like protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU185815 | lncRNA | upstream | 69814 | 2058533 ~ 2058770 (+) | False | AMCG00000073 |
| TU185772 | lncRNA | upstream | 299041 | 1820357 ~ 1829543 (+) | True | G147635 |
| TU185687 | lncRNA | upstream | 508509 | 1619172 ~ 1620075 (+) | True | G147580 |
| TU185686 | lncRNA | upstream | 512633 | 1613310 ~ 1615951 (+) | True | G147579 |
| TU185671 | lncRNA | upstream | 540289 | 1588077 ~ 1588295 (+) | True | G147565 |
| TU185836 | lncRNA | downstream | 155242 | 2291140 ~ 2358137 (+) | True | G147688 |
| TU185838 | lncRNA | downstream | 165589 | 2301487 ~ 2368445 (+) | True | G147689 |
| TU185834 | lncRNA | downstream | 214143 | 2350041 ~ 2354058 (+) | True | G147687 |
| TU185889 | lncRNA | downstream | 342812 | 2478710 ~ 2478958 (+) | True | G147735 |
| TU185893 | lncRNA | downstream | 389293 | 2525191 ~ 2525421 (+) | True | G147739 |
| AMCG00000070 | mRNA | upstream | 13417 | 2114661 ~ 2115167 (+) | True | AMCG00000070 |
| AMCG00000073 | mRNA | upstream | 69819 | 2036023 ~ 2058765 (+) | True | AMCG00000073 |
| AMCG00000072 | mRNA | upstream | 93942 | 2013547 ~ 2034642 (+) | True | AMCG00000072 |
| AMCG00000067 | mRNA | upstream | 267840 | 1860508 ~ 1860744 (+) | True | AMCG00000067 |
| AMCG00000066 | mRNA | upstream | 346813 | 1740809 ~ 1781771 (+) | True | AMCG00000066 |
| AMCG00000074 | mRNA | downstream | 436881 | 2572779 ~ 2607991 (+) | True | AMCG00000074 |
| AMCG00000086 | mRNA | downstream | 640769 | 2776667 ~ 2790487 (+) | True | AMCG00000086 |
| AMCG00000088 | mRNA | downstream | 704017 | 2839915 ~ 2841035 (+) | True | AMCG00000088 |
| AMCG00000085 | mRNA | downstream | 722255 | 2858153 ~ 2860184 (+) | True | AMCG00000085 |
| AMCG00000075 | mRNA | downstream | 940287 | 3076185 ~ 3107875 (+) | True | AMCG00000075 |
| TU185496 | other | upstream | 1011634 | 1063085 ~ 1116950 (+) | True | G147416 |
| TU185369 | other | upstream | 1630073 | 449652 ~ 498511 (+) | True | G147311 |
| TU185240 | other | upstream | 1881579 | 240502 ~ 247005 (+) | True | AMCG00000032 |
| TU185255 | other | upstream | 2063295 | 64746 ~ 65289 (+) | False | AMCG00000025 |
| TU185221 | other | upstream | 2092010 | 35282 ~ 36574 (+) | False | AMCG00000026 |
| TU185878 | other | downstream | 267832 | 2403730 ~ 2403972 (+) | True | G147726 |
| TU186234 | other | downstream | 1557211 | 3693109 ~ 3695802 (+) | False | AMCG00000094 |
| TU186257 | other | downstream | 1585087 | 3720985 ~ 3724316 (+) | True | AMCG00000093 |
| TU186262 | other | downstream | 1624281 | 3760179 ~ 3760624 (+) | True | G148040 |
| TU186772 | other | downstream | 3299260 | 5435158 ~ 5435762 (+) | False | AMCG00000142 |
