RNA id: AMCG00000125



Basic Information


Item Value
RNA id AMCG00000125
length 318
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00000125
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4749902 ~ 4751180 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGCTGGGTGGCGAGTGGAAGTAACCTGACCATGATGGCTTTTGTGACTGGACAGTGTCCTTCGAGCCACCATGACTTTGGAGATAAGACAGTGGGCCTGGTGACTGAGTTTGTGTGGAGGAGGCGCCGGTATCTGTTAGTAGAGTTGCTCGACTCAAGATGTTCCTCTCTATGCTGTTACTGCCTTAGCACATCCAGAGTACTGCGGGCCATCAGCTTCTCCACCAAGAGATATGCTATATCTTCATTCAGCTCTGCAGCATTTCTCTGGAATCGCGGTGATTGGAACAGAGCAAGGAGACCTTTTGCTGCTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186460 lncRNA downstream 201842 4547824 ~ 4548060 (-) True G148198
TU186436 lncRNA downstream 518574 4230642 ~ 4231328 (-) True G148181
TU186263 lncRNA downstream 989285 3760302 ~ 3760617 (-) True G148041
TU186232 lncRNA downstream 1061671 3687963 ~ 3688231 (-) True G148011
TU186213 lncRNA downstream 1107233 3642365 ~ 3642669 (-) True G147997
TU186647 lncRNA upstream 323250 5074430 ~ 5077246 (-) True AMCG00000161
TU186704 lncRNA upstream 485688 5236868 ~ 5240683 (-) True G148364
TU186748 lncRNA upstream 589575 5340755 ~ 5342491 (-) False G148395
TU186757 lncRNA upstream 626569 5377749 ~ 5380128 (-) True G148400
TU186775 lncRNA upstream 699820 5451000 ~ 5454248 (-) True G148416
AMCG00000124 mRNA downstream 247 4740357 ~ 4749655 (-) True AMCG00000124
AMCG00000123 mRNA downstream 10923 4726159 ~ 4738979 (-) True AMCG00000123
AMCG00000122 mRNA downstream 35863 4709866 ~ 4714039 (-) True AMCG00000122
AMCG00000117 mRNA downstream 570788 4159908 ~ 4179114 (-) True AMCG00000117
AMCG00000116 mRNA downstream 619059 4123155 ~ 4130843 (-) True AMCG00000116
AMCG00000130 mRNA upstream 14004 4765184 ~ 4796149 (-) True AMCG00000130
AMCG00000129 mRNA upstream 55991 4807171 ~ 4837550 (-) True AMCG00000129
AMCG00000131 mRNA upstream 92812 4843992 ~ 4860489 (-) True AMCG00000131
AMCG00000134 mRNA upstream 141309 4892489 ~ 4893367 (-) True AMCG00000134
AMCG00000160 mRNA upstream 249685 5000865 ~ 5066825 (-) True AMCG00000160
TU185384 other downstream 4264319 484720 ~ 485583 (-) True G147324
TU185352 other downstream 4357420 387118 ~ 392482 (-) True AMCG00000037
TU185350 other downstream 4357767 387118 ~ 392135 (-) False AMCG00000037
TU186746 other upstream 587629 5338809 ~ 5342491 (-) True G148395
TU186991 other upstream 1310142 6061322 ~ 6067184 (-) False AMCG00000177
TU187005 other upstream 1399540 6150720 ~ 6154266 (-) False AMCG00000168
TU187023 other upstream 1458094 6209274 ~ 6209957 (-) False AMCG00000189
TU187026 other upstream 1464576 6215756 ~ 6216441 (-) False AMCG00000190

Expression Profile