RNA id: AMCG00000146


Basic Information

Item Value
RNA id AMCG00000146
length 1862
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00000146
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5334513 ~ 5340550 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtacagcacagtggagccCAGATTGTGAACAATGAGTGCGGATCCTCCATGCTCGCAGAGAACATGTCACTTTGTTCATTTCACAGCGGAACCACCCATGATGAAAGTAGGAAGGTAGTCATGGACAACAGCACCTGTACCCCCCCTTACTCTGAGGACCGCATCCCCCTTGTTGTCCTCTACAGCATCGTGATCATCATCGGCCTCCCGGCCAACTTGGCCACAGTTTACATGACCTTCCTGCAAGTGCTAAGGAAGAATGTGCTGGGGATCTACCTGCTGAGCCTGTCCCTGTGCGACCTCATGTATCTCTGTACCCTGCCACTGTGGACCATCTACATCAACATGGGCCACGAGTGGCTGTGGGGCTCCATGGCCTGCAAGCTGACTGGCTACGTGTTCTTCAACAACATGTACATCAGCATCTTCCTCCTCTGCTGTGTCTCCATCGACCGCTATGTTGCTGTGGTGTACGCCGTGGAGTCCCGGGGCTTGAGGAAACAGAAGCTGGCGGGCATCATCACCTGCGCCCTGTGTGTGCTGGTGGCAGTGGGCCATGTCCCCGTTTTCATAATGAAAGAGGGCAATACGGAAGGGACGCAGAAACTGTGTTTCGAGCCCGGGCAGAACACAGCCATGGTGACAGGCTTCAACTACGCCCGCTTCTTCATCGGCTTCTTCATTCCCTTTGTAATCTTAGTGGTCACCAACCGCTCCATCTTCGTCAACATTCAGGCCAGCACGGGGCTGCGCAGGGAGCAGAAGGTGAAAGTGAAGTACTTGGCCATCGCTGTCATACTCTTGTTCTTGGTGTGTTTCGCCCCTTACCACATGATCCTCTTGCTCCGGGCAATCATGTTTCACTTCAACCTGAAAAACTGTGTCTTTGAGGACTACGTGTACACCCCCTACACCATCTCCCTGGGACTGTCCACCTTCAACAGCGCCATGAACCCTATTCTCTACGTGCTGGCCAGCGACAACATTCGCAAGGAGATCCGCCGCAGCCTGATCAGCTTTCGGAGCCGGACCTCTTTGCAGCACAAGGGCACGGACAGCAGCCTGCCAAAATTGCAGAACTCCAAAAACTCGTCCGACTCCACCCCCATGcgggacaacaacaacacctgAGCTTGCGCTGCATCAGGATATAATATGTCTTGTCTTTTCTGCAAGACGATATCTGCTGTTGACAAACCATGTTCCACTAAGTGTGAATGCTGCAAGACCTTAGTGGTTTCCTCTCTACAGGCCTCGTCTTTGGAGACTcttatacagcattttttccgTTCTGAAAGTATTTTGTATCTTCTCTGGAGTAGTTTTTCTGAACTGTTCATGGATAGAAAAAGGGACAAAGGAAGAAAATCTGGTGTTGATTTGTACAGACTAGTGCTCCTCTCTAAATTagtgaattaaaatacatgtgtgcatgtgtatgtgtatatgtatgcatatttacCAAAAGTATTAAGTAATACTTAATAGTAGTATTAAGCTTTTGACGGTGTCTGCAATAAGTTGGGCCTAAACGACTACTGCCGTCCTCCAGATGCCAATTCTGTGCCATTCCTCCCAGTGCAATGTCTAGTTCATTGAGAGCATTGGTCTCTGTCATCTCTATCTGACTGATGGGTCACGTTGATCCCTGAGCTGTTCTATTAGATTCCTAGGCAGGACTGTTTCACCAGGTATTCCTTATGAAGTCAAGAGCCCTTTGTGACGAAATGTGCTATCAGGCTGGTAGCTGTACAGGCACGCATTGTAGTATGCCGTCAATGCTGGCAGCATCCTGATGTCTCAAATGCCACCATGCAAAACAGGGGCAAAGGGGCCtgtaacaaattaaaagcaaaggaaac

Function

GO:

id name namespace
GO:0038166 angiotensin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG:

id description
K08426 GPR132, G2A; G protein-coupled receptor 132

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186722 lncRNA upstream 19560 5312878 ~ 5314953 (+) False AMCG00000145
TU186651 lncRNA upstream 173318 5088439 ~ 5161195 (+) False AMCG00000136
TU186654 lncRNA upstream 174980 5132609 ~ 5159533 (+) False AMCG00000136
TU186462 lncRNA upstream 751962 4582311 ~ 4582551 (+) True G148200
TU186391 lncRNA upstream 1158797 4173437 ~ 4175716 (+) True G148146
TU186749 lncRNA downstream 13401 5353951 ~ 5354185 (+) True G148396
TU186759 lncRNA downstream 42018 5382568 ~ 5388814 (+) True G148402
TU186817 lncRNA downstream 200129 5540679 ~ 5544478 (+) True G148452
TU186824 lncRNA downstream 337433 5677983 ~ 5678620 (+) True G148459
TU186834 lncRNA downstream 375043 5715593 ~ 5719481 (+) True G148468
AMCG00000148 mRNA upstream 5480 5320345 ~ 5329033 (+) True AMCG00000148
AMCG00000145 mRNA upstream 21552 5307190 ~ 5312961 (+) True AMCG00000145
AMCG00000139 mRNA upstream 97226 5207350 ~ 5237287 (+) True AMCG00000139
AMCG00000137 mRNA upstream 163087 5170061 ~ 5171426 (+) True AMCG00000137
AMCG00000136 mRNA upstream 177049 5140428 ~ 5157464 (+) True AMCG00000136
AMCG00000152 mRNA downstream 352 5340902 ~ 5373337 (+) True AMCG00000152
AMCG00000147 mRNA downstream 35065 5375615 ~ 5380159 (+) True AMCG00000147
AMCG00000141 mRNA downstream 49775 5390325 ~ 5395773 (+) True AMCG00000141
AMCG00000142 mRNA downstream 94975 5435525 ~ 5454206 (+) True AMCG00000142
AMCG00000143 mRNA downstream 123399 5463949 ~ 5470513 (+) True AMCG00000143
TU186262 other upstream 1573889 3760179 ~ 3760624 (+) True G148040
TU186257 other upstream 1610197 3720985 ~ 3724316 (+) True AMCG00000093
TU186234 other upstream 1638711 3693109 ~ 3695802 (+) False AMCG00000094
TU185878 other upstream 2930541 2403730 ~ 2403972 (+) True G147726
TU185496 other upstream 4217563 1063085 ~ 1116950 (+) True G147416
TU186772 other downstream 94608 5435158 ~ 5435762 (+) False AMCG00000142
TU186901 other downstream 540473 5881023 ~ 5888027 (+) True AMCG00000166
TU187068 other downstream 1130881 6471431 ~ 6474232 (+) True AMCG00000201
TU187079 other downstream 1175957 6516507 ~ 6520822 (+) False AMCG00000198
TU187266 other downstream 1950116 7290666 ~ 7296664 (+) False AMCG00000216

Expression Profile